Gene Information

Name : BMA10247_2182 (BMA10247_2182)
Accession : YP_001081711.2
Strain :
Genome accession: NC_009080
Putative virulence/resistance : Virulence
Product : capsular polysaccharide export ABC transporter ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : 3.6.3.38
Position : 2146769 - 2147425 bp
Length : 657 bp
Strand : -
Note : identified by match to protein family HMM PF07298

DNA sequence : 
ATGATTCGACTGACTCGGGTCAAGAAAACGTATCAGACGAAATCCGGAGAGCGTACGGTTCTTGATGGCGTCGACGTTGA
TATAGCAAGTGGAGAAAAGATCGGTATTCTCGGTGGGAATGGCGCGGGGAAATCAACGCTGATTCGTATCATAAGCGGCG
CCGAGAGGCCGACCGAGGGGCGTGTGTACCGGGGAATGAGCGTCTCGTGGCCCTTGGCATTTGGCGGGGCATTCCAGACT
TCGCTCACGGGTATCGACAATCTTCGTTTTATATGTCGAATTTATGATGTATCGGTTGAGGACAAGCTTCCGTTTGTGCG
TGAATTCACCGAGCTTGGCAGATACCTCAACGAACCGGTCAAAACATATTCGGCGGGGATGCGGGCCAAGCTTGCCTTTG
CCATTTCGATGGCAGTGGATTTCGATTGTTTCCTCATCGATGAAGTCACGGCTGTCGGGGATGAGCGTTTCCGTCAAAAA
TGTCATGTGGAATTGTTCGAGAAGCGTAATTCCAGGGCAATGATTTTTGTTTCTCACGATCCGGGATTTATTCGCGCTAA
CTGTCAGCGAGCGACGGTTTTGCATGGGGGGAAGTTGTATGAATTTCCGGAAATGGACGAGGCGTATCATTTTTATCGGG
AAATGCAGCGCGTATAA

Protein sequence : 
MIRLTRVKKTYQTKSGERTVLDGVDVDIASGEKIGILGGNGAGKSTLIRIISGAERPTEGRVYRGMSVSWPLAFGGAFQT
SLTGIDNLRFICRIYDVSVEDKLPFVREFTELGRYLNEPVKTYSAGMRAKLAFAISMAVDFDCFLIDEVTAVGDERFRQK
CHVELFEKRNSRAMIFVSHDPGFIRANCQRATVLHGGKLYEFPEMDEAYHFYREMQRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 7e-63 59
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 8e-42 43
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMA10247_2182 YP_001081711.2 capsular polysaccharide export ABC transporter ATP-binding protein VFG2563 Protein 1e-101 100
BMA10247_2182 YP_001081711.2 capsular polysaccharide export ABC transporter ATP-binding protein VFG0696 Protein 8e-65 59
BMA10247_2182 YP_001081711.2 capsular polysaccharide export ABC transporter ATP-binding protein VFG0258 Protein 2e-63 59
BMA10247_2182 YP_001081711.2 capsular polysaccharide export ABC transporter ATP-binding protein VFG1449 Protein 3e-42 43