Name : xerD (BMA10247_0118) Accession : YP_001079697.1 Strain : Genome accession: NC_009080 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 116233 - 117234 bp Length : 1002 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGGCGCGCGCAGTGCATGCTTGCGCGGCCGACACGGCGGGCGGAGACGCCGGCCGCGCACCCGCGCCGCCGGCCGACCG TCCCGTGGACGCGCTTGCCGCGTCGCCGGCGTGGCTCGACAGCCGCGCGTCGATCGATCTGTTCTGCGACGCGATGTGGC TCGAGCACGGGCTGTCGCGCAACACGCTCGACGCGTACCGGCGTGATCTGCAACTGTTCGCGCAATGGCTCGCCGCGCGG CATGCGGCGAGCGTCGATCATGCGAGCGAGCCGACGCTGACCGAATACATCGCCGCGCGCAGCGACGGCAAGGCGACGTC GTCGAATCGCCGGCTATCGGTGTTTCGCCGCTACTACGGCTGGGCGGTGCGCGAGCACCGCGCGGCCGTCGATCCGACGC TCAGGATCGCGTCGGCGAAGCAGGCGCCGAGGTTTCCGTCGACGCTGTCCGAGGCGCAGGTCGAGGCGCTTCTCGCCGCG CCCGACGTCGATACGCCGCTCGGCCTGCGCGACCGCACGATGCTCGAACTGATGTATGCGAGCGGGTTGCGCGTGAGCGA GCTCGTCACGCTGAAGACGGTCGAGGTCGGATTGAACGAAGGCGTGGTGCGCGTGACGGGCAAGGGTTCGAAAGAGCGGC TCGTGCCGTTCGGCGAAGTCGCGCACGGCTGGATCGAGCGCTATCTGCGCGATGCACGGCCCGCGCTACTCGGTGCGCGC GCGGCGGATGCGCTGTTCGTCACCGCACGCGGCGACGGCATGACGCGCCAGCAATTCTGGAACATCATCAAGCGCCATGC GCAGCAGGCGGATGTTCGCGTGCATCTGTCGCCGCATACGCTGCGGCACGCGTTCGCGACGCATCTGCTCAATCACGGCG CGGACCTGCGGGTCGTGCAACTGCTGCTCGGCCATAGCGATATCTCGACGACGCAGATCTACACGCACGTCGCGCGCGAG CGGCTGAAGACGCTGCATGCGGCGCATCATCCGCGCGGATGA Protein sequence : MARAVHACAADTAGGDAGRAPAPPADRPVDALAASPAWLDSRASIDLFCDAMWLEHGLSRNTLDAYRRDLQLFAQWLAAR HAASVDHASEPTLTEYIAARSDGKATSSNRRLSVFRRYYGWAVREHRAAVDPTLRIASAKQAPRFPSTLSEAQVEALLAA PDVDTPLGLRDRTMLELMYASGLRVSELVTLKTVEVGLNEGVVRVTGKGSKERLVPFGEVAHGWIERYLRDARPALLGAR AADALFVTARGDGMTRQQFWNIIKRHAQQADVRVHLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARE RLKTLHAAHHPRG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 4e-59 | 55 |
BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 4e-59 | 55 |