|
Name : gabD (BMA10247_A0808) Accession : YP_001078008.1 Strain : Genome accession: NC_009079 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 744865 - 746334 bp Length : 1470 bp Strand : - Note : identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780 DNA sequence : ATGACTACAGCTCACGAAACCCTTGCACTGAAAGATCCCGCGCTGTTGCGCGAGCGCGCGTTCGTCGCGGGCGAATGGCA GGCCGCCGACGGCGGCGCGACGCTCGAGGTCCGCAACCCGGCGACGGGCGCGCTGATCGGCACGGTGCCCGCGATGGGCG CGGCCGAGACGCGCCGCGCGATCGACGCGGCGAACGCCGCGTGGCCCGCCTGGCGCAAGAAGACCGCGAAGGAGCGCGCG GCGATCCTGCGCAAGTGGCACGATCTGATGATCGCGCACGCGGACGATCTCGCGCTGATCCTGACGACCGAGCAGGGCAA GCCGCTCGCCGAGGCAAAGGGCGAGATCGGCTATGCGGCGTCGTTCCTCGAATGGTTCGCCGAGGAAGGCAAGCGCGTGT ACGGCGATACGATCCCGACGCCCGCCGCCGACAAGCGGATCGTCGTGACGAAGGAGCCGGTGGGCGTGTGCGCGGCGATC ACGCCGTGGAACTTCCCGGCGGCGATGATCACGCGCAAGGTCGGCCCGGCGCTCGCGGCCGGTTGCCCGATCGTCGTGAA GCCGGCCGAGGCCACGCCGTTCTCGGCGCTCGCGATGGCGGTGCTCGCCGAGCGCGCGGGCGTGCCGGCCGGCGTGTTCA GCGTCGTCACGGGCGAGCCGAAGGCGATCGGCGGCGAACTCACGTCGAACCCGATCGTGCGCAAGCTGTCGTTCACCGGC TCGACGCCGGTCGGACGCCTGCTGATGGCGCAATGCGCGGCGACGGTCAAGAAGGTGTCGCTCGAGCTCGGCGGCAACGC GCCGTTCATCGTGTTCGACGACGCGGATCTCGATGCGGCCGTCGAGGGCGCGATCGCATCGAAGTACCGCAACAGCGGGC AGACCTGCGTCTGCACGAACCGCTTCTACGTGCACGAGAAGGTCTACGACGCGTTCGCCGAGAAGCTGACCGCGGCCGTC GCGAAGCTGAAGGTCGGGCCCGGCACCGAGGCCGGCGTCGTGCAGGGCCCGCTCATCAACGGCGCGGCGGTGCGCAAGGT CGAAGCGCACATCGCCGACGCGCTCGACAAGGGCGCGCGCGTGACGACGGGCGGCCAGCGCCACCCGCTCGGCCACGGCT TCTTCGAGCCGACCGTGCTGACGGGCGTCACGCCCGACATGAAGGTCGCGAAGGAGGAAACGTTCGGCCCGCTCGCGCCG CTGTTCAGGTTCTCGACCGAGGAAGAAGCGATCCGCTACGCGAACGACACCGAGTTCGGCCTCGCCGCGTACTTCTACAG CCGCGACATCGGCCGCGTGTGGCGCGTGGCCGAGGCGCTCGAATACGGGATGGTCGGCATCAACGCCGGAATCATCTCGA ACGAGGTCGCGCCGTTCGGCGGCGTCAAGCAATCGGGCCTCGGCCGCGAGGGCTCGCACTACGGGATCGACGATTACGTC GTGATCAAGTACATGTGCGTCGCGGTGTGA Protein sequence : MTTAHETLALKDPALLRERAFVAGEWQAADGGATLEVRNPATGALIGTVPAMGAAETRRAIDAANAAWPAWRKKTAKERA AILRKWHDLMIAHADDLALILTTEQGKPLAEAKGEIGYAASFLEWFAEEGKRVYGDTIPTPAADKRIVVTKEPVGVCAAI TPWNFPAAMITRKVGPALAAGCPIVVKPAEATPFSALAMAVLAERAGVPAGVFSVVTGEPKAIGGELTSNPIVRKLSFTG STPVGRLLMAQCAATVKKVSLELGGNAPFIVFDDADLDAAVEGAIASKYRNSGQTCVCTNRFYVHEKVYDAFAEKLTAAV AKLKVGPGTEAGVVQGPLINGAAVRKVEAHIADALDKGARVTTGGQRHPLGHGFFEPTVLTGVTPDMKVAKEETFGPLAP LFRFSTEEEAIRYANDTEFGLAAYFYSRDIGRVWRVAEALEYGMVGINAGIISNEVAPFGGVKQSGLGREGSHYGIDDYV VIKYMCVAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 9e-151 | 68 |
