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Name : bsaQ (BMA10247_A0742) Accession : YP_001077943.1 Strain : Genome accession: NC_009079 Putative virulence/resistance : Virulence Product : type III secretion system protein BsaQ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 686176 - 688248 bp Length : 2073 bp Strand : + Note : identified by match to protein family HMM PF00771; match to protein family HMM TIGR01399 DNA sequence : ATGCTGAAGAATCTCCTGATCAAGGCCCAAGCGCGCCCCGAACTGATCGTCCTGTGCCTGATGGTGCTCGTGATCGCGAT GCTGATCGTGCCGCTGCCGCCGTACGTGCTCGATTTCCTGATCGGCCTGAACATCGTGACGGCGCTGCTCGTGTTCATGG GCTCGTTCTACATCGTCAACATCCTCGAGTTCTCGACGTTTCCGCCGATCCTGCTGATCACGACGCTGTTCCGGCTCGCG CTGTCGATCAGCACGAGCCGGATGATCCTGCTCACCGCCGAGGGCGGCAAGATCATCACGACGTTCGGGCAGTTCGTGAT CGGCGATAACCTCGTGGTCGGCTTCGTCGTGTTCGTGATCGTGACGATCGTGCAGTTCATCGTGATCACGAAGGGCTCGG AGCGCGTCGCCGAAGTCGCGGCGCGCTTCTCGCTCGACGCGATGCCCGGCAAGCAGATGAGCATCGACGCGGACCTGCGC GCCGGCATCATCGACAACGAAGGCGTGAAGGCGCGCCGCTCGGCGCTCGAGCGTGAAAGCCAGCTGTACGGCTCGTTCGA CGGCGCGATGAAGTTCATCAAGGGCGATGCGATCGCCGGCATCGTCGTCATCTTCGTGAACCTGATCGGCGGCATCTCGG TCGGCGTGATGCAGCACGGCATGTCGGTGTCCGACGCGCTCACGACCTACACGATCCTGTCGATCGGCGACGGCCTCGTC GCGCAGATCCCGGCGCTCCTGATCGCGATCGGCGCGGGCTTCGTCGTCACCCGCGTGGGCGGCTCGGGCAACAACCTCGG CGCGAACATCGTCGGCGAGCTGTTCTCGAACCCGTTCGTGCTCGTCGTCACGGCCGTGCTCGCGCTCGCGATCGGCCTGC TGCCCGGCTTTCCGCTGATCGTCTTCCTGCTGATCGCGCTCGCGCTCGGCGCGCTGTACGTGCGCCGCGAATGGCGCAAG CCGGGCGAGCCGGCGCGCGAGGGCGGGCTCGTCGGCAAGGTCGCGGGCGCGCTCTCGGGCGGCGGCGCGGCGAAAGCGGC CGACGGCGGCGCCGGCGATGTCGACATCGACAAGCTGATTCCGGAGACGGTGCCGCTGATGCTGATGGTGCCCGAGGCGG CGCAGCCGATGTTCGAGCAGGAAGGCGTGATCGGCGCGTTCCGGCGGCGCGCGTTCGTCGACATGGGGCTGCGCCTGCCC GACATCCGCGTCGTGTATTCGCCGCAGGTGCATCCGCGCGAGGCGATCGTGCTGATCAACGAGATTCGCGCGGCGACGTT CGCGATCTGCTTCGACCGGCACCGCGTGGTCGGCTCGACGCTCGCGCTCGAAGGGCTGCCCGTCGACGTCGTGACGCTGC CGGACGGCGCGGGCGGCGACGCGTGGTGGGTGCCGGGCGCGCAGACCGACGCGCTCGCGAAGATCGACGTGCTCACGCGC TCGGCGATCGACGATCTGTACGGGCAGTTTCTCGCGGTGATGCTCGCCAACGTATCGGAATTCTTCGGCGTGCAGGAAGC CAAGCGCCTGCTCGACGACATGGACCAGAAGTACCCGGAGCTCATCAAGGAGAGCTATCGGCACATTTCGGTGCAGCGCA TCGCGGAGGTGTTCCAGCGCCTGCTCGCCGAGAAGATCTCGATTCGCAACATGAAGCTGATTCTCGAATCGCTCGCGCAA TGGGGGCCGAAGGAGAAGGATTCGATCCTGCTCGTCGAGCACGTGCGCGCGGCGCTCGCGCGCTACATCTCGAACCGCTT CGCCGCGGGCGGCAAGCTGCGCGCGCTCGTGCTGTCGGCGCAGTTCGAGGACGCGGTGGGCAAGGGCGTGCGGCAGACCT CGGGCGGCGCGTATCTGAACCTGGAGCCCGCGACGAGCGAGCAACTGCTCGACCGGCTCGCGCTCGAGCTCGCGCGCGCG GGCTTCTCGCAGCGCGACATGGTGCTGCTTGCCTCGATGGAAGTCAGGCGTTTCGTCAAGCGGCTGATCGAGAGCCGCTT TCCGGAACTGGAGGTGCTGTCGTTCGGCGAAGTGGCCGACAGCGTCGCAATCGATGTGTTGAAGACGATCTAA Protein sequence : MLKNLLIKAQARPELIVLCLMVLVIAMLIVPLPPYVLDFLIGLNIVTALLVFMGSFYIVNILEFSTFPPILLITTLFRLA LSISTSRMILLTAEGGKIITTFGQFVIGDNLVVGFVVFVIVTIVQFIVITKGSERVAEVAARFSLDAMPGKQMSIDADLR AGIIDNEGVKARRSALERESQLYGSFDGAMKFIKGDAIAGIVVIFVNLIGGISVGVMQHGMSVSDALTTYTILSIGDGLV AQIPALLIAIGAGFVVTRVGGSGNNLGANIVGELFSNPFVLVVTAVLALAIGLLPGFPLIVFLLIALALGALYVRREWRK PGEPAREGGLVGKVAGALSGGGAAKAADGGAGDVDIDKLIPETVPLMLMVPEAAQPMFEQEGVIGAFRRRAFVDMGLRLP DIRVVYSPQVHPREAIVLINEIRAATFAICFDRHRVVGSTLALEGLPVDVVTLPDGAGGDAWWVPGAQTDALAKIDVLTR SAIDDLYGQFLAVMLANVSEFFGVQEAKRLLDDMDQKYPELIKESYRHISVQRIAEVFQRLLAEKISIRNMKLILESLAQ WGPKEKDSILLVEHVRAALARYISNRFAAGGKLRALVLSAQFEDAVGKGVRQTSGGAYLNLEPATSEQLLDRLALELARA GFSQRDMVLLASMEVRRFVKRLIESRFPELEVLSFGEVADSVAIDVLKTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 4e-165 | 56 |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 2e-166 | 56 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-166 | 56 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 2e-166 | 56 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 2e-166 | 56 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 2e-150 | 54 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 7e-155 | 53 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 1e-112 | 42 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-96 | 41 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| bsaQ | YP_001077943.1 | type III secretion system protein BsaQ | VFG2461 | Protein | 0.0 | 100 |
| bsaQ | YP_001077943.1 | type III secretion system protein BsaQ | VFG0557 | Protein | 8e-167 | 56 |
| bsaQ | YP_001077943.1 | type III secretion system protein BsaQ | VFG1006 | Protein | 4e-167 | 56 |
| bsaQ | YP_001077943.1 | type III secretion system protein BsaQ | VFG1780 | Protein | 6e-171 | 55 |
| bsaQ | YP_001077943.1 | type III secretion system protein BsaQ | VFG0198 | Protein | 9e-107 | 42 |
| bsaQ | YP_001077943.1 | type III secretion system protein BsaQ | VFG0384 | Protein | 2e-114 | 42 |
| bsaQ | YP_001077943.1 | type III secretion system protein BsaQ | VFG0064 | Protein | 9e-111 | 42 |
