Gene Information

Name : BMA10247_A1624 (BMA10247_A1624)
Accession : YP_001078807.1
Strain :
Genome accession: NC_009079
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1564720 - 1565379 bp
Length : 660 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAGAGTGCTTCTCGTCGAAGACGATCCGTGGCTCGGCGAGGCCGTCCGCGCCCAGATCGAGAAGGACGGGCATCCGAC
CGATTGCGTCGCGAGCCTCGCGCACGCGCGGCGGCACGTCGCGGTCGCGCCCTACGATCTGATCCTGCTCGATCTGCTGC
TGCCCGACGGGCGTGGGCTCGATTTCCTGCGCGAGCTGCGCGCGGGCGGCTCGACGGTGCCCGTCATCATCCTGACCGCG
CTCGATCAGGTCGCGAACCGGATCGCGGGGCTGAACGCCGGCGCCGACGACTATCTGATCAAGCCGTTCGACCTGTCCGA
GTTGTCCGCGCGCGTGAGCGCGGTCGCGCGCCGCTATTCGGGCAATCCGAATCCGCTCGTGAAGCTCGGCGAGCTCGCGG
TCGACATCGCCGCGCGCAGCGTGACGCGCGCCGGCGCGCGGGTCGACCTGACCGCGAGCGAATGGGCGCTGCTCGAAACG
CTGATCCAGCATCCGGGGATGATCCTGTCGAAGCCGCAGCTCGAGGAGCGGCTGTATTCGTTCAGCGACGAAGTCGGCAG
CAATACGATCGAAGTGCATGTGAGCCGCCTGCGCAAGAAGCTCGGCGCCGAGCTGATCGAGACCGTGCGCGGCCTCGGCT
ATCGCCTGAGGCGGGACTAG

Protein sequence : 
MRVLLVEDDPWLGEAVRAQIEKDGHPTDCVASLAHARRHVAVAPYDLILLDLLLPDGRGLDFLRELRAGGSTVPVIILTA
LDQVANRIAGLNAGADDYLIKPFDLSELSARVSAVARRYSGNPNPLVKLGELAVDIAARSVTRAGARVDLTASEWALLET
LIQHPGMILSKPQLEERLYSFSDEVGSNTIEVHVSRLRKKLGAELIETVRGLGYRLRRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMA10247_A1624 YP_001078807.1 DNA-binding response regulator BAC0638 Protein 8e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMA10247_A1624 YP_001078807.1 DNA-binding response regulator VFG1390 Protein 3e-25 43