Gene Information

Name : BURPS1106A_A0866 (BURPS1106A_A0866)
Accession : YP_001074902.1
Strain :
Genome accession: NC_009078
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 857721 - 858383 bp
Length : 663 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGCGCGTATTGCTTGTCGAAGACGATCCGCTCATCGGCAGCGGGCTCGAACAGGGGCTGAAACAGGAAGGCTTCGCGGT
GGACTGGGCGCAGAACGCCGACGCGGCGACGCTCGCGCTGCGCACGACGTCGTACGGCCTGCTGCTGCTCGACCTCGGCC
TGCCGGACAAGGACGGCCTCGCGGTGCTCGCCGCGCTGCGCCGCCGCGACGACGCGCTGCCCGTGATCGTCGTCACCGCG
CGCGACGCGCTGCCCGACCGGATCGCGGGCCTCGATTGCGGCGCGGACGATTACCTCGTCAAGCCGTTCGCGCTCGAGGA
ACTGCTCGCGCGCATCCGCGCGGTGAACCGCCGCCAGGCCGGCCGCGCGCAGACGGTGCTCGCGGTCGGCGCGCTGCGGC
TCGATCCGGCGCGCCATCAGGTGTGGCGCGGCGACGAGGAAGTCGCGCTGTCGCCGAAGGAATTCGTGCTGCTGCACGAG
CTGATGCGCGAGCCGGGCGCGGTGATCTCGCGCGAGCAGTTCGAGGAGCGGCTGTACAGCTGGGGCGAGGAAATCGAGAG
CAACGCGGTGCAGGTGCATATCCACAACCTGCGCAAGAAGCTCGGCCACGACACGATCCTCACGGTGCGCGGCGTCGGCT
ACCGGATCGGAGACGGCGCATGA

Protein sequence : 
MRVLLVEDDPLIGSGLEQGLKQEGFAVDWAQNADAATLALRTTSYGLLLLDLGLPDKDGLAVLAALRRRDDALPVIVVTA
RDALPDRIAGLDCGADDYLVKPFALEELLARIRAVNRRQAGRAQTVLAVGALRLDPARHQVWRGDEEVALSPKEFVLLHE
LMREPGAVISREQFEERLYSWGEEIESNAVQVHIHNLRKKLGHDTILTVRGVGYRIGDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-34 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BURPS1106A_A0866 YP_001074902.1 DNA-binding response regulator Y16952.3.orf35.gene. Protein 3e-26 41
BURPS1106A_A0866 YP_001074902.1 DNA-binding response regulator BAC0083 Protein 8e-26 41
BURPS1106A_A0866 YP_001074902.1 DNA-binding response regulator U82965.2.orf14.gene. Protein 1e-29 41
BURPS1106A_A0866 YP_001074902.1 DNA-binding response regulator BAC0197 Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BURPS1106A_A0866 YP_001074902.1 DNA-binding response regulator VFG0473 Protein 1e-39 51
BURPS1106A_A0866 YP_001074902.1 DNA-binding response regulator VFG1390 Protein 9e-23 41