Gene Information

Name : tISRso (BURPS1106A_A2730)
Accession : YP_001076760.1
Strain :
Genome accession: NC_009078
Putative virulence/resistance : Unknown
Product : isrso12-transposase orfa
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2664279 - 2664590 bp
Length : 312 bp
Strand : -
Note : identified by match to protein family HMM PF01527

DNA sequence :
GTGTGCGAGCGGGCACGACGGCCCTGCCATGAAGGCGAGCAGTTTACGGAGGCGCAGATCGTATACGCGTTGAAGCAGGC
CGAACCGGGTACGACGGTCGCGAAGGTATGCCGCAAGCTGAGAATCAGCGACGCGACGTTTTACAGCCGGCGAACGAAAT
ACGGCGGGCTGTCGCCCTCGGAGTTGCATTGGGTAAAGCCGCTTGAAGACGAGAACGCGAAGCTCGAGCGGCTCGTGGCC
GACCTCTCGCTGGACAAGGCGATGCTGCGGAACGTGCCGTCAAAGAGCTCTGAAACCTTCTCGGCGCCGTGA

Protein sequence :
MCERARRPCHEGEQFTEAQIVYALKQAEPGTTVAKVCRKLRISDATFYSRRTKYGGLSPSELHWVKPLEDENAKLERLVA
DLSLDKAMLRNVPSKSSETFSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-20 64
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-20 64
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-13 46
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-12 44
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-12 44
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-12 43
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-12 43