Gene Information

Name : sciM (BURPS1106A_A0240)
Accession : YP_001074284.1
Strain :
Genome accession: NC_009078
Putative virulence/resistance : Virulence
Product : SciM protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 228605 - 229090 bp
Length : 486 bp
Strand : -
Note : identified by match to protein family HMM PF05638

DNA sequence :
ATGGCGCAGGATATTTTTCTGAAGATCGACGGCATCAACGGTGAATCCCTCGACGACAGCCACAAGGACGAGATCGAAGT
CCTGAACTGGAACTGGGAGATTCAGCAGGAATCGACGATGCACACGGGCAGCGGCGGCGGCGCCGGCAAGGCGAGCGTGA
AGGATCTGACGTTCGAGCACGCGATCGACCGCGCGAGCCCCAACCTGATGAAGTACGCGCTGACCGGCAAGCACGTCGAT
CAGGCGGTGCTCGTGATGCGCAAGGCGGGCGGCAATCCGCTCGAATACCTGAAGCTCACGATGAGCGACGTGATCATCAC
GCGCGTGCGGCCGTCGGGCAGCCGCGACGACACCGAGCGCAGCCGCGAGACGGTATCGCTGTCGTTCGCGAAGGTGAAGC
AGGAGTATGTCGTGCAGAACGCGCAGGGCGGCAGCGGCGGCGCCGTCACGACGAGCTTCGACATCAAGGGCAACAAGGAA
GCCTGA

Protein sequence :
MAQDIFLKIDGINGESLDDSHKDEIEVLNWNWEIQQESTMHTGSGGGAGKASVKDLTFEHAIDRASPNLMKYALTGKHVD
QAVLVMRKAGGNPLEYLKLTMSDVIITRVRPSGSRDDTERSRETVSLSFAKVKQEYVVQNAQGGSGGAVTTSFDIKGNKE
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0302 NP_454882.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-48 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sciM YP_001074284.1 SciM protein VFG2071 Protein 2e-21 46