Gene Information

Name : BURPS1106A_A2205 (BURPS1106A_A2205)
Accession : YP_001076238.1
Strain :
Genome accession: NC_009078
Putative virulence/resistance : Virulence
Product : type III secretion system ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 2153727 - 2155055 bp
Length : 1329 bp
Strand : +
Note : identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02546

DNA sequence :
ATGAACGCGCTGGCCGATCTGTCCCGCGTCGCCGACGCGATGGCCGCCCGACTCGCGATCGAGCCCGCCGTCGGCATGAC
CGGCAAGGTGCTCGAAGTGATCGGCACGCTCGTGCGCGTGGTCGGCCTCGAAGCGACGCTCGGCGAGCTCTGCGAGCTGC
GCGGCGCGTCGGGCGCGCTGATCCAGCATGCGGAAGTCGTCGGCTTCACGCGCAACGTCGCGCTGCTGTCGCCGTTCGGC
ACGCTCGGCGAGATCAATCGCGGCACGCGCGTGATCGGCCTGCGGCGGCCGCTGTCGGTGAAGGTCGGCAACGGCATCCT
CGGGCGCGTGATCGACAGCTTCGGCGAGCCGATCGACGGGCGCGGCGAGCTCGACTACGACGCGCTGCGCCCCGTGATCG
CGGCGCCGCCGAACCCGATGTCGCGGCGCATGGTCGACGCCTCGCTCGCGACCGGCGTGCGCATCGTCGACGGCCTGATC
ACGCTCGGCGAAGGCCAGCGCATGGGGATCTTCGCGCCCGCCGGCGTCGGCAAGAGCACGCTGCTCGGCATGTTCGCGCG
CGGCGCGTCGTGCGACGTCAACGTGATCGCGCTGATCGGCGAGCGCGGCCGCGAGGTGCGCGAGTTCGTCGAGCTGATCA
TGGGCGAGGACGGGATGGCGCGCTCGGTCGTCGTGTGCGCGACGTCCGACCGCTCGTCGATCGAACGCGCGAAGGCCGCG
TACGCGGCGACCGCGATCGCCGAGTACTTCCGCGACCAGGGCAAGCGCGTGCTGCTGATGATGGATTCGCTCACGCGCTT
CGCGCGCGCCGGCCGCGAGATCGGCCTCGCGGCCGGCGAGCCGCCCGCGCGGCGCGGCTTCCCGCCTTCCGTGTTCGCCG
AGCTGCCGCGCCTGCTCGAGCGCACCGGGATGGGCGAGCACGGCTCGATCACCGCGCTCTACACGGTGCTCGCCGAGGAC
GACTCCGGCAGCGATCCGATCGCCGAGGAAGTGCGCGGCATTCTCGACGGCCACATCATCCTGTCGCGCGAGATCGCCGC
GCGCAACCAGTATCCGGCGATCGACGTGCTCGGCAGCCTGTCGCGGATCATGCCGCAGGTCGCGACGCGCGAGCATGTCG
GCGCGGCCGGCCGGCTGCGCCAGTTGCTCGCGAAGCACCGCGAGATCGAGACGCTGTTGCAGCTCGGCGAATACCAGGCG
GGCAGCGATCCGGCCGCCGACGAGGCGGTCGCGAAGATCGACCGGATCCGTGCGTTCCTCAACCAGCGCACCGACGAATA
CTCGCCGCCCGACGCGACGCTCGCCGCGCTGCACGAGCTCGTCCGATGA

Protein sequence :
MNALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQHAEVVGFTRNVALLSPFG
TLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGELDYDALRPVIAAPPNPMSRRMVDASLATGVRIVDGLI
TLGEGQRMGIFAPAGVGKSTLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAA
YAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTGMGEHGSITALYTVLAED
DSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQA
GSDPAADEAVAKIDRIRAFLNQRTDEYSPPDATLAALHELVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-132 73
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-132 73
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-134 72
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-134 72
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-133 72
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 8e-133 72
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-133 72
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-132 72
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-133 72
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-94 58
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-78 54
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-81 53
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-78 53
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-81 52
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-81 52
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-76 51
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-76 51
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-82 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-82 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-82 50
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-82 50
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 5e-83 50
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-83 50
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-83 49
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 8e-82 49
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-82 49
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-84 49
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 5e-82 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-76 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-76 46
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-70 46
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 3e-70 46
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-70 46
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-70 46
escN AAC38383.1 EscN Virulence LEE Protein 4e-77 45
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-76 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-76 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-76 45
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-74 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-76 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-76 45
escN AAK26715.1 EscN Virulence LEE Protein 2e-76 45
escN AAL57542.1 EscN Virulence LEE Protein 2e-76 45
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-62 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-77 44
escN AAC31513.1 L0034 Virulence LEE Protein 2e-77 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-77 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-77 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 4e-64 44
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 5e-67 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG0390 Protein 2e-95 57
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG0192 Protein 4e-95 56
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG0048 Protein 5e-100 55
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG0515 Protein 1e-82 50
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG2144 Protein 3e-86 49
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG2459 Protein 6e-71 48
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG2499 Protein 4e-71 48
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG1254 Protein 2e-78 47
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG1008 Protein 4e-68 47
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG0555 Protein 1e-70 46
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG1778 Protein 3e-66 46
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG0730 Protein 2e-77 45
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG2331 Protein 5e-63 45
BURPS1106A_A2205 YP_001076238.1 type III secretion system ATPase VFG0812 Protein 1e-77 44