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Name : BURPS1106A_A2075 (BURPS1106A_A2075) Accession : YP_001076108.1 Strain : Genome accession: NC_009078 Putative virulence/resistance : Virulence Product : type III secretion, low calcium response chaperone LcrH/SycD Function : - COG functional category : S : Function unknown COG ID : COG1729 EC number : - Position : 2039736 - 2040251 bp Length : 516 bp Strand : - Note : identified by match to protein family HMM PF07720; match to protein family HMM TIGR02552 DNA sequence : ATGACGCAACGCGACGTGAACATAGACGACATCGAGGCGCAGGAAATGGCGGCGGCGCTGCTGGACGCGGTCCAGAACGG CGCGACGCTGAAGGACCTGCATCAGGTGCCGCAGGACCTGATGGACGGCATCTATGCGTTCGCGTACCGCTTCTACCAGC AGGGGCGGCTCGACGACGCGGAGGTGTTCTTCCGCTTTCTGTGCATCTACGACTTCTACAACGCCGAATACGCGATGGGG CTCGCGGCGGTGTGCCAGTTGAAGAAGGAGTACGCGCGGGCGATCGATCTGTATGCACTCGCGTATTCGCTGTCGAAGGA CGACCACCGGCCGATGTTCCACACCGGCCAATGCCATCTGCTGATGGGCAAGGCGGCGCTCGCGCGGCGCTGCTTCGGCA TCGTCGTCGAGCGCTCGCGCGACGAGCGCCTCGCGCAGAAGGCGCAGTCCTATCTCGACGGGCTCGACGAAGTGGGCGCC GACGCGGCGCCCGCATCCGCCGGGAACGACCACTAG Protein sequence : MTQRDVNIDDIEAQEMAAALLDAVQNGATLKDLHQVPQDLMDGIYAFAYRFYQQGRLDDAEVFFRFLCIYDFYNAEYAMG LAAVCQLKKEYARAIDLYALAYSLSKDDHRPMFHTGQCHLLMGKAALARRCFGIVVERSRDERLAQKAQSYLDGLDEVGA DAAPASAGNDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sycB | AAS66850.1 | SycB | Not tested | SSR-1 | Protein | 9e-38 | 62 |
| spaT | NP_806489.1 | hypothetical protein | Virulence | SPI-1 | Protein | 2e-45 | 60 |
| sicA | NP_461807.1 | secretion chaperone | Virulence | SPI-1 | Protein | 2e-45 | 60 |
| sicA | YP_217805.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-45 | 60 |
| spaT | NP_457280.1 | unknown function | Virulence | SPI-1 | Protein | 2e-45 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BURPS1106A_A2075 | YP_001076108.1 | type III secretion, low calcium response chaperone LcrH/SycD | VFG2451 | Protein | 2e-76 | 100 |
| BURPS1106A_A2075 | YP_001076108.1 | type III secretion, low calcium response chaperone LcrH/SycD | VFG0547 | Protein | 7e-46 | 60 |
| BURPS1106A_A2075 | YP_001076108.1 | type III secretion, low calcium response chaperone LcrH/SycD | VFG0988 | Protein | 6e-44 | 51 |
| BURPS1106A_A2075 | YP_001076108.1 | type III secretion, low calcium response chaperone LcrH/SycD | VFG1769 | Protein | 1e-38 | 47 |
