|
Name : Mjls_4673 (Mjls_4673) Accession : YP_001072929.1 Strain : Mycobacterium sp. JLS Genome accession: NC_009077 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 4906885 - 4908444 bp Length : 1560 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_4037 integrase, catalytic region DNA sequence : GTGTCGTTTTCGGAGGACTGTGTCCGGTTTGGGGATCGGCTAGCGCGGTTGGTTGATGCCGGGGTGCCGGTGAAGGAGGC GGCGGTCGCTACTGGGGTTTCGCGTGACCGGTGTTATGCGATTCTGCGGGCGATCGGCCGGCCTGTCGGGCAGGCCCGTG GTCGGGGTGAGCGCGCTGATCAGCGTGGGGTGGCCGACCTGGGTGTGGTCGTGGCCGTATTCAAGGACACCGGTTCGATC CTGCAGGCGGCCACAGCGTGTGGGGTGTCGCATTCGACGGCACGCAAACTGTTGGTCGCCGAGGGGCTGGTGACCAGCGG GAAGATCCCGTGGGGCAAGCCCGAGGCGAAACGTCGGTGCTTGGAGCTGTTCGAGCAGGGTTGGTCCACCGGGGCAGCGG CGCGGGAGGTCGGTGTCAACGTGCGGACCGCGCGGGACTGGCGCAAGGGGATCCGGCACACCAACAACACGCGGGTTCAC CCCGATGGTCGGGTCGTGGACTACACCGACCGGACCGTCTACAAACAGTCGGTGAGCAACCTGATCTGCGATGACACCGG ACGGCCGGCCATCGATGACCGGTATCTGTCGGTCCAGGACCGAGTGGCGATCGCCGATGGCCTCCTCGGGAAGGAGTCGT TACGGACGATCGCCGGGCGGATCGGCAAAAACGTTTCCACGGTGTCGCGGGAGATTCGTGCGCGCAGCATTGATGGCCGC TATCTGCCGTATCACGCCGATCGGGCGGCTGCCTCGGCCCGGGCTCGGCCCAAGCAGTCCAAACTGGTGGTCAACGTGGT CCTGCGGGGAGCGGTTGAAGAAGGCCTGTCGCGCAAGCTGTCACCGGAGCAGATCTCCAATCGCCTCCGTCGGGATCATC CCGACGACGAGAGCATGCAGGTGAGCCACGAAACGATCTACCAAGCCCTCTACTTCCAGGCGCGCGGTGGCCTCAAAAAG GAAGTGCAGCAAGCACTTCGAACCGGGCGCACCCGACGCAAACCACACCGCAAAGAAGGCGAGCGCTATCAGCGCTTCAC CGACCCGATGGTGATGATCAGCGACCGCCCAGCCGAGGTGGACGACCGTGCGGTTCCCGGGCATTGGGAAGGGGATTTGA TCACCGGGGAGAAGAACCAGACCGCGATCGGCACTCTGGTCGAGCGATCGACGCGCTACACCATGCTGGTGCACCTGCCA GGCGGGCACGACGCCGAATCGGTACGGGATGCACTAATTGCGACTATCAGCACTCTTCCGGCGCATCTGCGTGGCTCACT GACTTGGGACCAAGGCTGCGAGATGGCAGGGCACAAGCAGTTCACGATGGCCACCGATATGGCCGTGTACTTCTGCGATC CGGCCAGTCCCTGGCAGCGCGGCAGCAACGAGAACACCAACGGCCTGCTGCGCCAGTACTTCCCCAAAGGCACCGACCTG AGCATCTACGGACCCGAGGACCTCGAACACGTCGCCCAAGAACTCAACGGCCGCCCACGCAAAACGCTCGGCTGGGATAC CCCAGCCGAGCGCCTGCGTGATCTACTACTGACCAATTAA Protein sequence : MSFSEDCVRFGDRLARLVDAGVPVKEAAVATGVSRDRCYAILRAIGRPVGQARGRGERADQRGVADLGVVVAVFKDTGSI LQAATACGVSHSTARKLLVAEGLVTSGKIPWGKPEAKRRCLELFEQGWSTGAAAREVGVNVRTARDWRKGIRHTNNTRVH PDGRVVDYTDRTVYKQSVSNLICDDTGRPAIDDRYLSVQDRVAIADGLLGKESLRTIAGRIGKNVSTVSREIRARSIDGR YLPYHADRAAASARARPKQSKLVVNVVLRGAVEEGLSRKLSPEQISNRLRRDHPDDESMQVSHETIYQALYFQARGGLKK EVQQALRTGRTRRKPHRKEGERYQRFTDPMVMISDRPAEVDDRAVPGHWEGDLITGEKNQTAIGTLVERSTRYTMLVHLP GGHDAESVRDALIATISTLPAHLRGSLTWDQGCEMAGHKQFTMATDMAVYFCDPASPWQRGSNENTNGLLRQYFPKGTDL SIYGPEDLEHVAQELNGRPRKTLGWDTPAERLRDLLLTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDC7B_2034 | YP_005163475.1 | transposase-like protein | Not tested | Not named | Protein | 7e-59 | 47 |
| DIP0764 | NP_939135.1 | transposase | Not tested | Not named | Protein | 2e-59 | 47 |
| CDC7B_2059 | YP_005163500.1 | transposase-like protein | Not tested | Not named | Protein | 4e-59 | 47 |
