|
Name : Mjls_3413 (Mjls_3413) Accession : YP_001071682.1 Strain : Mycobacterium sp. JLS Genome accession: NC_009077 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 3579979 - 3582312 bp Length : 2334 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: mmc:Mmcs_3402 RNA binding S1 DNA sequence : GTGACTTCGAGCCTGACCGTCAGATCCGTAAATGCCCGTCTCGCTGAGGAACTCGCCGTCGGTGAGGGGCAGGTCGCGGC CGCCGTCCGGTTGCTCGACGAAGGCGCCACCGTGCCGTTCATCGCCCGCTACCGCAAGGAGGTCACCGGCAGCCTCGACG ACGCGCAACTGCGCACGCTCGAAGAACGCCTGAACTACCTGCGGGAACTCGACGAGCGGCGGGCGGCGGTGCTGGCCTCC ATCGAGGAGCAGGGCAAACTCACCGACGACCTCAGAACCGCGCTGCTGACCGCCGACACCAAGTCGCGGGTCGAGGACAT CTACCTGCCGTACAAGCCGAAGCGGCGCACGAAGGCGCAGATCGCCAGGGAGGCGGGCCTCGAACCGCTCGCCGACCGCC TGCTCGCCGATCCGACGCTGGTCCCCGAGGATGCAGCGGCTCGGTTCCTCGCCGACGGTGTGCCCGACGCTGCCGCCGCA CTCGACGGGGCGCGCCACATCCTGATCGAGCGTGCGGCCGAGGACGCCGATCTGGTCGGCGCCGTACGCGAGAAGTTCTG GACCGACGGGGCGCTGCGCACCTCACCCCGCTCCGACGAGGTCGCCAAGACCCCGGCGGCCCAGAAGTTCCGCGACTACT TCGAATTCTCCGAACCCCTGCAGAACATGCCGTCGCACCGCGTGCTCGCGGTGATGCGCGGCGAGAAGGAAGAGGTGCTG TCGCTGAACTTCGACGGGGGAGACGACGACCTCTACCTCGCGATGGTGGCCCAGACCCTGGGCATCGACATGGCGTCGAC GGCCCCGGCGACACCGTGGCTGGCGACCACCGTCCGGTTGGCGTGGCGGGTCAAGCTGATGGTCTCGGCGGCCGTCGCCG CACGTGTCCGCCTGCGGCAACGCGCGGAAGAGGATGCGGTCGCGGTGTTCGCCCGCAACCTCAAGGACCTGCTGCTCGCC GCCCCCGCGGGTTCCCGGACCACCCTGGGCCTCGACCCGGGCTTCCGCACGGGTGTCAAGGTGGCCGTCGTCGACGGCAC CGGCAAGGTCGTCGACACCTGCGCGATCTTCCCGCATCAGCCGCAGAAGCAGTGGGATCAGGCCAAGGCCACGCTCGCGG CGCTCGTCGCCCGCCACGGGGTCGAGTTGATCGCCGTCGGCAACGGCACCGCATCGCGCGAAACCGACGCGCTGGCAGCC GAACTCATCGCCGACATCGCGGCGGCGGGGGCCAAGGCGCCGGTGAAGGCGATGGTCAGCGAGGCCGGGGCGTCGGTGTA CTCCGCCTCGGCGTACGCCGCGCACGAACTGCCCGCGCTGGACGTGACGTTGCGGGGTGCGGTGTCCATCGCACGCCGGT TGCAGGATCCGCTCGCCGAACTGGTCAAGATCGAGCCGAAGTCGATCGGGGTGGGCCAGTACCAGCACGACGTGACGCCG GGGACCCTGGCGCGCAGCCTCGACGCCGTGGTCGAGGACGCCGTCAACGCCGTCGGCGTCGACCTGAACACCGCGTCGGT GCCGCTGCTGTCCCGGGTGTCGGGTGTCACCGACACGCTCGCCGAGGCCATCGTCGCCCACCGTGAGAAGACCGGGCCGT TCCGCAACCGCACAGCACTGCTGGACGTCCCGCGCTTGGGGCCCAAGGCTTTCGAACAGTGCGCGGGCTTCCTCCGGATC ACCGGCGGGGACGATCCGCTGGACGCCTCCGGTGTGCACCCCGAGGCCTACCCGGTGGTGCGGCGCATCCTCGACCGGTC GGGGGTCACCCTGACCGAGATCATCGGCAACGAACGGCAGCTGCGCTCGCTCAAACCCGCCGACTTCGCCGACGACCGGT TCGGCATCCCGACCGTCAGCGACATCCTGGCCGAACTCGAGAAGCCCGGCCGTGACCCCCGGCCGGCGTTCTCGACGGCG ACGTTCGCGGCCGGTGTCGAGAAGGTGGCCGATCTGAAGGTCGGCATGGTGCTCGAGGGGGTGGTGACCAACGTCGCCGC GTTCGGGGCGTTCGTCGACGTCGGCGTGCACCAGGACGGGCTGGTCCACGTCTCCGCGATGGCCGACCGTTTCGTCTCCG ATCCGCACGAGGTGGTGCGGTCCGGTCAGGTGGTGCGGGTCAAGGTCGTCGAGGTCGACGTGGACCGGCAGCGGATCGGG CTGAGCCTGCGCCTGGGCGACACACCGCAGCGCGACAAGGCCAAACCGCGCCAGAACGCCGGCGCGCCGCGGCCACAGCA GAAGCGAAACCCCAAGCGCGACAACGATCGTCGCGAGAAGGCACCGTCGGGGTCGATGGCGCAGGCGCTGCGCGACGCCG GCTTCGGTCGGTAG Protein sequence : MTSSLTVRSVNARLAEELAVGEGQVAAAVRLLDEGATVPFIARYRKEVTGSLDDAQLRTLEERLNYLRELDERRAAVLAS IEEQGKLTDDLRTALLTADTKSRVEDIYLPYKPKRRTKAQIAREAGLEPLADRLLADPTLVPEDAAARFLADGVPDAAAA LDGARHILIERAAEDADLVGAVREKFWTDGALRTSPRSDEVAKTPAAQKFRDYFEFSEPLQNMPSHRVLAVMRGEKEEVL SLNFDGGDDDLYLAMVAQTLGIDMASTAPATPWLATTVRLAWRVKLMVSAAVAARVRLRQRAEEDAVAVFARNLKDLLLA APAGSRTTLGLDPGFRTGVKVAVVDGTGKVVDTCAIFPHQPQKQWDQAKATLAALVARHGVELIAVGNGTASRETDALAA ELIADIAAAGAKAPVKAMVSEAGASVYSASAYAAHELPALDVTLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVTP GTLARSLDAVVEDAVNAVGVDLNTASVPLLSRVSGVTDTLAEAIVAHREKTGPFRNRTALLDVPRLGPKAFEQCAGFLRI TGGDDPLDASGVHPEAYPVVRRILDRSGVTLTEIIGNERQLRSLKPADFADDRFGIPTVSDILAELEKPGRDPRPAFSTA TFAAGVEKVADLKVGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMADRFVSDPHEVVRSGQVVRVKVVEVDVDRQRIG LSLRLGDTPQRDKAKPRQNAGAPRPQQKRNPKRDNDRREKAPSGSMAQALRDAGFGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-177 | 57 |
