Gene Information

Name : Mjls_2222 (Mjls_2222)
Accession : YP_001070499.1
Strain : Mycobacterium sp. JLS
Genome accession: NC_009077
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2319275 - 2320111 bp
Length : 837 bp
Strand : -
Note : PFAM: Integrase, catalytic region; KEGG: mtc:MT2881 IS6110, transposase

DNA sequence : 
GTGCAGATCGCCCCCTCGACGTACTACGAGCATCTCGAGCGTGAGCCCAGCCGTCGTGAGGTCCGCGACGAGGCACTCAA
AGCCGACGTCCACCGGGTTCACGGCGCGAACTACGGCGTCTACGGTGCGCGCAAGGTGTGGCTGGCGCTCAACCGCGAGG
GCATTGAGGTGGCCCGCTGCACGGTGGAGCGACTGATGGCCGAACTCGGTCTACGCGGTGCGGTACGCGGCAAGGCCACG
ACGACCACCATCGCTGACCCGGGCGCGGTGCGGCCGGCTGATCTGGTCGGGCGCCGCTTCGGCCCGGTCGCACCGAACCG
ATTGTGGGTGGCGGATCTGACGTATGTGTCGACCTGGTCGGGATTCGCCTACGTCGCGTTTGTCACCGATGCCTATGCCC
GCCGGATCCTGGGCTGGCGGGTGGCATCGACGATGGCGACCACGATGGTGCTCGACTCGATCGAGCAGGCCATCTGGACA
CGACAGGGAGAAGGCGAAGTCGATTTGAAAGATGTTGTCCACCATACGGATCGAGGATCGCAGTATACGTCGATTCGGTT
CACGGAGCGGCTCGCCGAGGCGCGTATTCAGCCGTCGGTCGGGGCGGTCGGAAGCTCCTATGACAACGCGCTCGCCGAGA
CCATCAACGGCCTCTACAAGACCGAGCTGATCAAACCGGGCAAGCCCTGGCGCACCATCGAGGACGTCGAGCTGGCGACC
GCCCGCTGGGTCGACTGGTTTAACCACCGCCGGCTCTACGAGTACTGCGGAGACGTCCCACCAGCCGAGCTTGAGGCCGC
CTACTACGCTCAACGCTCGAGGCCAGCCGCAAGCTGA

Protein sequence : 
MQIAPSTYYEHLEREPSRREVRDEALKADVHRVHGANYGVYGARKVWLALNREGIEVARCTVERLMAELGLRGAVRGKAT
TTTIADPGAVRPADLVGRRFGPVAPNRLWVADLTYVSTWSGFAYVAFVTDAYARRILGWRVASTMATTMVLDSIEQAIWT
RQGEGEVDLKDVVHHTDRGSQYTSIRFTERLAEARIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRTIEDVELAT
ARWVDWFNHRRLYEYCGDVPPAELEAAYYAQRSRPAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 1e-51 57
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-59 57
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-51 56
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 8e-48 56
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-61 54
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-64 54
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-64 54
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-62 54
Z1221 NP_286756.1 transposase Not tested TAI Protein 9e-65 54
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 1e-61 54
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-62 54
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 9e-65 54
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-62 54
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-61 54
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-61 54
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-63 54
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 7e-64 54
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-63 54
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-63 54
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-63 53
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-61 52
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-44 52
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 2e-36 47
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 4e-50 46
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 6e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mjls_2222 YP_001070499.1 integrase catalytic subunit VFG1602 Protein 1e-61 52