Gene Information

Name : Mjls_1979 (Mjls_1979)
Accession : YP_001070257.1
Strain : Mycobacterium sp. JLS
Genome accession: NC_009077
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2087261 - 2087983 bp
Length : 723 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_1998 ABC transporter related

DNA sequence : 
ATGACCGCCATCGAAGAACGCCGCGACCACGACACGACCACCTCGCCGCCACTGCCGGTCATCGAGATCGCCGACGTGTG
GAAACTGCACAAACTCGGCGACGAAGTGGTGCGCGCGCTGGTCGCCGCGGACCTGACCGTGATGCCGGGCGAGTTCGTCT
GCCTGATGGGACCGAGCGGCAGCGGAAAGTCCACGCTGCTCAACATCATCGGCGGGCTGGACCGCCCGACGAAGGGTTCG
GTGGCGGTCGCCGGGCGCGACACCCGCACGCTGACGGAAAGCCAGTTCGCCGCGTTACGCCACGACACCATCGGGTTCAT
CTTCCAGAGCTACAACCTGATCCCGTTCCTGTCGGCGGTCGAGAACGTCGAACTGCCGCTGATGTTCGAGCCCTACGACC
GCAAAGCGTTGCGCACCAGAGCGATCGAGTTGCTCGAACTGGTCGGCCTCGGCCACCGCATTGACCACCAGCCGACCAAG
ATGTCCGGCGGTGAACAGCAGCGCACGGCGATCGCGCGCTCGCTGATCAGCAGTCCGGCGCTCGTCCTCGCCGACGAGCC
CACAGCCAACCTCGACCACCGCACGGGGGAGACGGTGGTGCGCATGCTGCGCGACCTGTGTTCGACGCTGGGCGTCACGG
TCGTCGCGAGCACCCACGACCCCACGGTGGCCGACGAAGCGAGCCGTGTCGTCCGGATGAAAGACGGACAAATCGTCAAC
TGA

Protein sequence : 
MTAIEERRDHDTTTSPPLPVIEIADVWKLHKLGDEVVRALVAADLTVMPGEFVCLMGPSGSGKSTLLNIIGGLDRPTKGS
VAVAGRDTRTLTESQFAALRHDTIGFIFQSYNLIPFLSAVENVELPLMFEPYDRKALRTRAIELLELVGLGHRIDHQPTK
MSGGEQQRTAIARSLISSPALVLADEPTANLDHRTGETVVRMLRDLCSTLGVTVVASTHDPTVADEASRVVRMKDGQIVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mjls_1979 YP_001070257.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-37 46
Mjls_1979 YP_001070257.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-40 43
Mjls_1979 YP_001070257.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-38 41