|
Name : BURPS1106A_3289 (BURPS1106A_3289) Accession : YP_001067526.1 Strain : Genome accession: NC_009076 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis/export periplasmic protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 3205515 - 3206636 bp Length : 1122 bp Strand : - Note : identified by match to protein family HMM PF02563 DNA sequence : ATGGGCGCGGTCACGCTCGCCGGTTGCTCAAGTATCCCTACGTCGGGGGCCAGTGGCGCGCAAATCGCGCGGGCTGCGCA GAGTCCATCCGGAATTCAGATCGTCGATGTGACCGAGGATGTCGCGCGCCAGCTGTTTGCTGATCGAAACACGGCGGACT TCGTGACGGCGCTGGGCGGCGGTGCGTCGTTCCGGCAACAGTTGGGCGTCGGCGATACGATTCAGGTGTCCATCTGGGAG GCGCCACCCGCCACGCTTTTTGGCGCGGCTCAGTCGGAAGGGAGTTCGGGGCCGGCGAACGCGCGCGTGACGGTGTTGCC CGATCAAGCCATCGATGGCGACGGCAATGTCAATATTCCGTTTGCGGGCCAGGTGAAGGCGGCCGGCCGCTCGCCCACGC AGTTGGCGCGTGAGATTGCCGCGCGGCTGAAGAGCATGGCGCACGATCCGCAAGTGCTCGTGAAGCTTTCACGCAACGAG ACGTCATATGTGACGGTCGTGGGCGATGTGGCCGAAAACGCTCGCATGGCTCTGACCGCTCGGGGCGAGCGCCTGCTTGA TGCATTGGCGAGCGCAGGCGGGGCGAAGCACCCGGTTGACAAAGTTACGATCCAGATAACGCGCGGCAAGACGGTGGCCT CGTTGCCGCTCGACATGGTTATTCGTGATCCGCGGCAGAACGTCCCGTTGCATGCGGGCGATGTGGTCACTGTCCTGTTT CAGCCATATAGCTTTACGGTGCTCGGCGCGACGGGCAAGAATGACGAAATCAATTTTGAAGCGAAGGGCATCACGCTTGC GCAGGCCCTGGCGCGTGCTGGCGGCTTGCAGGATTCGCGCGCCGATGCAAAGGGCGTATTCATCTTCCGACTTGAAGACG CCAACGCGCTGAAATGGCCGACGGCTCCCGTGCGTACGACTGCGGATGGAAAGGTGCCTGTCGTGTATCGCGTGAATCTT CGCGATCCGAATTCGTTCTTCGTGGCTCAGAGCTTCAGGGTCGACAACAACGATCTGTTGTACGTTTCGAATGCGCCGAT TGCCGAACTTCAAAAATTCTTGAATGTCGTGTTCTCCGTTGCGTATCCGGTGATTACCGGCGTTCAGACAGTCAGGTACT GA Protein sequence : MGAVTLAGCSSIPTSGASGAQIARAAQSPSGIQIVDVTEDVARQLFADRNTADFVTALGGGASFRQQLGVGDTIQVSIWE APPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNE TSYVTVVGDVAENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLHAGDVVTVLF QPYSFTVLGATGKNDEINFEAKGITLAQALARAGGLQDSRADAKGVFIFRLEDANALKWPTAPVRTTADGKVPVVYRVNL RDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLNVVFSVAYPVITGVQTVRY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrA | NP_273135.1 | capsule polysaccharide export outer membrane protein | Not tested | IHT-A | Protein | 8e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BURPS1106A_3289 | YP_001067526.1 | capsular polysaccharide biosynthesis/export periplasmic protein | VFG2566 | Protein | 1e-164 | 100 |
| BURPS1106A_3289 | YP_001067526.1 | capsular polysaccharide biosynthesis/export periplasmic protein | VFG0255 | Protein | 3e-66 | 42 |
