Gene Information

Name : BURPS668_A0958 (BURPS668_A0958)
Accession : YP_001061957.1
Strain :
Genome accession: NC_009075
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 932717 - 933379 bp
Length : 663 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGCGCGTATTGCTTGTCGAAGACGATCCGCTCATCGGCAGCGGGCTCGAACAGGGGCTGAAACAGGAAGGCTTCGCGGT
GGACTGGGCGCAGAACGCCGACGCGGCGACGCTCGCGCTGCGCACGACGTCGTACGGCCTGCTGCTGCTCGACCTCGGCC
TGCCGGACAAGGACGGCCTCGCGGTGCTCGCCGCGCTGCGCCGCCGCGACGGCGCGCTGCCCGTGATCGTCGTCACCGCG
CGCGACGCGCTGCCCGACCGGATCGCGGGCCTCGATTGCGGCGCGGACGATTACCTCGTCAAGCCGTTCGCGCTCGAGGA
ACTGCTCGCGCGCATCCGCGCGGTGAACCGCCGCCAGGCCGGCCGCGCGCAGACGGTGCTCGCGGTCGGCGCGCTGCGGC
TCGATCCGGCGCGCCATCAGGTGTGGCGCGGCGACGAGGAAGTCGCGCTGTCGCCGAAGGAATTCGTGCTGCTGCACGAG
CTGATGCGCGAGCCGGGCGCGGTGATCTCGCGCGAGCAGTTCGAGGAGCGGCTGTACAGCTGGGGCGAGGAAATCGAGAG
CAACGCGGTGCAGGTGCATATCCACAACCTGCGCAAGAAGCTCGGCCACGACACGATCCTCACGGTGCGCGGCGTCGGCT
ACCGGATCGGAGACGGCGCATGA

Protein sequence : 
MRVLLVEDDPLIGSGLEQGLKQEGFAVDWAQNADAATLALRTTSYGLLLLDLGLPDKDGLAVLAALRRRDGALPVIVVTA
RDALPDRIAGLDCGADDYLVKPFALEELLARIRAVNRRQAGRAQTVLAVGALRLDPARHQVWRGDEEVALSPKEFVLLHE
LMREPGAVISREQFEERLYSWGEEIESNAVQVHIHNLRKKLGHDTILTVRGVGYRIGDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-37 50
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BURPS668_A0958 YP_001061957.1 DNA-binding response regulator BAC0487 Protein 4e-32 46
BURPS668_A0958 YP_001061957.1 DNA-binding response regulator Y16952.3.orf35.gene. Protein 2e-27 41
BURPS668_A0958 YP_001061957.1 DNA-binding response regulator BAC0083 Protein 4e-28 41
BURPS668_A0958 YP_001061957.1 DNA-binding response regulator U82965.2.orf14.gene. Protein 1e-30 41
BURPS668_A0958 YP_001061957.1 DNA-binding response regulator BAC0197 Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BURPS668_A0958 YP_001061957.1 DNA-binding response regulator VFG0473 Protein 5e-43 51
BURPS668_A0958 YP_001061957.1 DNA-binding response regulator VFG0596 Protein 3e-25 41