Gene Information

Name : tISRso14b (BURPS668_A0634)
Accession : YP_001061633.1
Strain :
Genome accession: NC_009075
Putative virulence/resistance : Unknown
Product : isrso14-transposase orfb
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 592509 - 593342 bp
Length : 834 bp
Strand : +
Note : identified by match to protein family HMM PF00665

DNA sequence :
GTGTTGGCGATTCGGGAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTTTCTCGCAGCGTGCTGCA
TTACGACGCGAAGCCGGACCACGAGAATGAGGTGCTCGCGGCGCGTCTGGTGAAGTTGGCGCACGAACGTCGTCGATTCG
GCTACCGCCGACTGCACGCCCTGGTGGAACGCGAAGGCACGCACGCCAATCACAAGCGCATCTATCGCCTGTACCGTGAG
GCAGGGCTGGCTGTGCGGCGCCGTCGCAAGCGCCACGGCGTCATGATTGAGCGCGAGCAACTGGCATTGCCGGGCGCACC
CAACGAGGTGTGGTCAATCGATTTCGTGATGGATGCGCTTTCCAACGGCCGGCGCGTGAAGTGCCTGACCGTCGTCGACG
ATTTCACGAAAGAGGCTGTCGACATCGTCGTCGACCATGGCATCTCAGGTTTGTATGTCGCTCGGGCATTGGACCGTGCA
GCTCGCTTCCGTGGCTATCCCAAGGCGGTGCGAACAGACCAGGGCCCCGAATTTACGAGCCGCGCGCTTGACCAGTGGGC
GTATGCGAACGGCGTCACGCTGAAGTTGATTCAGGCGGGCAAGCCAACGCAGAATGCGTACATCGAATCGTTCAACGGCA
AGTTCCGCGACGAATGCCTTAACGAGCACTGGTTCACGACGCTCGCGCACGCTCGGGCAGTCATCGCGGCATGGCGTCAG
GACTACAACGAGCAAAGGCCGCACAGCGCACTGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGC
GGACGCTCCTGCCGCTTTCCAGGAGTTGGTTTAA

Protein sequence :
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRLYRE
AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA
ARFRGYPKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
DYNEQRPHSALNYLAPSEFAAKHRATADAPAAFQELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-73 75
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-94 71
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 3e-54 66
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 7e-46 44
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 1e-44 44