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Name : BURPS668_A2163 (BURPS668_A2163) Accession : YP_001063157.1 Strain : Genome accession: NC_009075 Putative virulence/resistance : Virulence Product : type III secretion, low calcium response chaperone LcrH/SycD Function : - COG functional category : - COG ID : - EC number : - Position : 2101122 - 2101637 bp Length : 516 bp Strand : - Note : identified by match to protein family HMM PF07720; match to protein family HMM TIGR02552 DNA sequence : ATGACGCAACGCGACGTGAACATAGACGACATCGAGGCGCAGGAAATGGCGGCGGCGCTGCTGGACGCGGTCCAGAACGG CGCGACGCTGAAGGACCTGCATCAGGTGCCGCAGGACCTGATGGACGGCATCTATGCGTTCGCGTACCGCTTCTACCAGC AGGGGCGGCTCGACGACGCGGAGGTGTTCTTCCGCTTTCTGTGCATCTACGACTTCTACAACGCCGAATACGCGATGGGG CTCGCGGCGGTGTGCCAGTTGAAGAAGGAGTACGCGCGGGCGATCGATCTGTATGCACTCGCGTATTCGCTGTCGAAGGA CGACCACCGGCCGATGTTCCACACCGGCCAATGCCATCTGCTGATGGGCAAGGCGGCGCTCGCGCGGCGCTGCTTCGGCA TCGTCGCCGAGCGCTCGCGCGACGAGCGCCTCGCGCAGAAGGCGCAGTCCTATCTCGACGGGCTCGACGAAGTGGGCGCC GACGCGGCGCCCGCATCCGCCGGGAACGACCACTAG Protein sequence : MTQRDVNIDDIEAQEMAAALLDAVQNGATLKDLHQVPQDLMDGIYAFAYRFYQQGRLDDAEVFFRFLCIYDFYNAEYAMG LAAVCQLKKEYARAIDLYALAYSLSKDDHRPMFHTGQCHLLMGKAALARRCFGIVAERSRDERLAQKAQSYLDGLDEVGA DAAPASAGNDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sycB | AAS66850.1 | SycB | Not tested | SSR-1 | Protein | 2e-37 | 62 |
| sicA | YP_217805.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-45 | 60 |
| spaT | NP_457280.1 | unknown function | Virulence | SPI-1 | Protein | 1e-45 | 60 |
| spaT | NP_806489.1 | hypothetical protein | Virulence | SPI-1 | Protein | 1e-45 | 60 |
| sicA | NP_461807.1 | secretion chaperone | Virulence | SPI-1 | Protein | 1e-45 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BURPS668_A2163 | YP_001063157.1 | type III secretion, low calcium response chaperone LcrH/SycD | VFG2451 | Protein | 4e-76 | 99 |
| BURPS668_A2163 | YP_001063157.1 | type III secretion, low calcium response chaperone LcrH/SycD | VFG0547 | Protein | 4e-46 | 60 |
| BURPS668_A2163 | YP_001063157.1 | type III secretion, low calcium response chaperone LcrH/SycD | VFG0988 | Protein | 1e-43 | 51 |
| BURPS668_A2163 | YP_001063157.1 | type III secretion, low calcium response chaperone LcrH/SycD | VFG1769 | Protein | 2e-38 | 47 |
