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Name : BURPS668_3090 (BURPS668_3090) Accession : YP_001060102.1 Strain : Genome accession: NC_009074 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3031195 - 3033108 bp Length : 1914 bp Strand : - Note : identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02629; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGACGCGAGCATTTTGCCCGAAGGCTTCGTGGCTTTCCCTGGGCGCCTTTCTGTTCGATCTGATGGCGGTCGTATGCGC GTGGCTGATCGCGTATGTGGTCCGGTTCAATGGTGCGATGCCGCCTGAATTCCTGAAAGGCGCCTTCGTCGCGCTCGCAT GGGTGGTGCCGTTGTATGGCCTGCTGTTTCATGTTTTCGGGTTGTATCGCGGTCTCTGGGTATTTGCGAGCCTGCCGGAT CTGCTGCGTATCTCGAAGGCCGTGGTGGGCGGCGGCTTGATCGTGATGATCGGCGCGGTGATGCTGCAGCCGGTTCCGAT CATTCCGCGTTCGGTTCTCGTGCTGTCGCCGATGCTGCTGTTTCTTGCGATGGGCGGTGCACGTGCGCTCTATCGGGCGA CGAAGGAGTTCTATCTGTACGGCGGACTGATCGGGCAGGGCAAGCCCGTGCTGATTCTCGGCGCCGGCAGTGCCGGCGCG AGCCTCGCCCGTGAACTGTCGCGCTCCGGTGAGTGGCGTCTTGCCGGTCTGCTCGATGACGATCCCGCGAAACACGGGCG CGAAGTCTACGGCTATAAGGTACTGGGTTCGATCGGCGAAGTCGCAGACTGGGCCGAGGCCGCGAAAGCCGAATACGCGA TCATCGCGATTCCATCCGCATCGGTCGAAGCGCAACGTCGCTTCGCCACCCTCTGCGTGCGCGCCGGCGTCAGGGCCATG GTGCTGCCGTCGCTGACCGCATTGATGCCGGGCCAGGGCATTCTGTCGCAGATCCGCCAGATCGATCTCGAAGACCTGCT CGGCCGCGAGGCCGTGACGATCGACACGCCGCACGTCGAGGCGCTGCTGCGCGGCCGCGTCGTGATGGTGACGGGCGCGG GCGGCTCGATCGGCTCGGAGCTGTGCCGCCAGATCCTGAAGTTCCAGCCCGCGCAACTGATCGCGTTCGATCTGTCCGAA TATGCGATGTACCGGCTCACGGAAGAGTTGCGCGAGCGCTTCCCCGATCTGCCCGTCGTGCCGATCATCGGCGATGCGAA GGATTCGCTGCTGCTCGATCAGGTGATGTCGCGCTATGCGCCGCACATCGTGTTCCATGCGGCCGCGTACAAGCACGTGC CGTTGATGGAGGAGCTCAACGCATGGCAGGCGCTGCGCAACAACGTGCTCGGCACGTATCGCGTCGCGCGCGCGGCGATT CGCCACGACGTCAGGCACTTCGTGCTGATCTCGACCGACAAGGCCGTGAACCCGACGAACGTGATGGGCGCGAGCAAGCG CCTGGCCGAGATGGCTTGCCAGGCGCTGCAGCAGACGAGCGCGCGCACGCAGTTCGAGACGGTGCGCTTTGGCAACGTGC TCGGCAGCGCCGGCAGCGTGATTCCGAAATTTCAGCAGCAGATCGCCAAGGGCGGCCCGGTGACCGTCACGCATCCGGAA ATCACGCGCTTCTTCATGACGATTCCCGAGGCGTCGCAACTCGTGCTGCAGGCGTCGAGCATGGGGCAGGGCGGCGAGAT CTTCATTCTCGACATGGGCGAGCCGGTGAAGATCGTCGATCTCGCGCGCGATCTGATTCGCCTGTACGGCTTCACCGAGG AGCAGATCCGCATCGAGTTCAGCGGGCTGCGCCCGGGCGAGAAGCTCTATGAGGAACTGCTCGCCGACGACGAGACCACC ACCCGCACGCCACACCCGAAGCTGCGCACCGCGAAGGCGCGCGAGGTGCCCGATCATCTGCTCGACGAACTGCTGCCGTG GCTGATGCAGCACCGCGTGCTGAGCGACGATGAAGTGCGGCGCGACTTGCGGCGCTGGGTGCCCGAGTATCAGCCGGCCG TCGGCCCGACGCTGCAGAGCGTGCCGACCGGCAACGGGCTCGTCGCCGGCATCGGGCGCGAGGCGGGGCGCTGA Protein sequence : MTRAFCPKASWLSLGAFLFDLMAVVCAWLIAYVVRFNGAMPPEFLKGAFVALAWVVPLYGLLFHVFGLYRGLWVFASLPD LLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSPMLLFLAMGGARALYRATKEFYLYGGLIGQGKPVLILGAGSAGA SLARELSRSGEWRLAGLLDDDPAKHGREVYGYKVLGSIGEVADWAEAAKAEYAIIAIPSASVEAQRRFATLCVRAGVRAM VLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSIGSELCRQILKFQPAQLIAFDLSE YAMYRLTEELRERFPDLPVVPIIGDAKDSLLLDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAI RHDVRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPE ITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGFTEEQIRIEFSGLRPGEKLYEELLADDETT TRTPHPKLRTAKAREVPDHLLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQPAVGPTLQSVPTGNGLVAGIGREAGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-85 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-86 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BURPS668_3090 | YP_001060102.1 | capsular polysaccharide biosynthesis protein | VFG1300 | Protein | 4e-87 | 43 |
| BURPS668_3090 | YP_001060102.1 | capsular polysaccharide biosynthesis protein | VFG0029 | Protein | 1e-75 | 43 |
