Gene Information

Name : BURPS668_2984 (BURPS668_2984)
Accession : YP_001059998.1
Strain :
Genome accession: NC_009074
Putative virulence/resistance : Virulence
Product : site-specific recombinases, DNA invertase Pin
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 2929833 - 2930444 bp
Length : 612 bp
Strand : -
Note : identified by match to protein family HMM PF00239

DNA sequence :
GTGGAAAAATCTTTCGATTTTTCCACAAACATGAGAATCGGTTACGCCAGAGTTTCCACGCAAGAGCAGGAAACGCGAGC
GCAAATCGACGCACTGACGAAGGCCGGCGTCGATGCAATCCACGAAGAAAAACGGTCTGGCGCAACTCTGCGCCGACCTG
TTCTAGACAAACTCCTCAGAAACCTCAAGCGAGGCGACACCCTTGTCGTCTACAAGCTCGACCGCATCGCGCGATCGCTC
AAACATCTACTCAGCATCATCGATCGATTGCAGGAACGCGGGGCGGGCTTCGAGAGCCTTACCGAGCACATCGACACCAA
TTCCCCTGCGGGACGCTTGATGCTTCAAATGCTTGGGGCCTTTGCCGAATTCGAGCGAGAAATGATTCGCGAGCGGACAA
AGAGCGGCATGCAGGCTGCAAAAAGGCGAGGCATTCGCCTAGGGCGCCCGCGCAGTCTCGAAAGCGAGGACGAGCGCCGC
GTCGTGCGCCAATGGCGCACTGGACGCTACACGCTAACCGCACTCGCTCACGAATACGGTGTTCACCTATCAAGCATCAA
GCGGGCAATCTATCGCGCCGATCAACACGCACAGCCGCCGCTCATCCAGTAG

Protein sequence :
MEKSFDFSTNMRIGYARVSTQEQETRAQIDALTKAGVDAIHEEKRSGATLRRPVLDKLLRNLKRGDTLVVYKLDRIARSL
KHLLSIIDRLQERGAGFESLTEHIDTNSPAGRLMLQMLGAFAEFEREMIRERTKSGMQAAKRRGIRLGRPRSLESEDERR
VVRQWRTGRYTLTALAHEYGVHLSSIKRAIYRADQHAQPPLIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGF34985.1 resolvase Not tested SGI1 Protein 7e-31 47
res AGF35025.1 resolvase Not tested SGI1 Protein 7e-31 47
res AGF35059.1 resolvase Not tested SGI1 Protein 7e-31 47
res AGK06929.1 resolvase Not tested SGI1 Protein 7e-31 47
res AGK06966.1 resolvase Not tested SGI1 Protein 7e-31 47
res AGK07012.1 resolvase Not tested SGI1 Protein 7e-31 47
res AGK07070.1 resolvase Not tested SGI1 Protein 7e-31 47
res AAK02044.1 resolvase Not tested SGI1 Protein 7e-31 47
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 7e-31 47
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-24 44
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-24 44
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-24 44
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 4e-22 42
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 4e-22 42
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 5e-22 42
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 1e-20 42
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 2e-20 42
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 2e-20 42
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 4e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BURPS668_2984 YP_001059998.1 site-specific recombinases, DNA invertase Pin VFG1030 Protein 2e-22 42