Gene Information

Name : lolD (BURPS668_2583)
Accession : YP_001059609.1
Strain :
Genome accession: NC_009074
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2553137 - 2553886 bp
Length : 750 bp
Strand : -
Note : identified by match to protein family HMM PF00005; match to protein family HMM TIGR02211

DNA sequence : 
ATGAATGACCGGGTTTTCGAGCAGACGATGAATCAGAACCATCAGGATGACGGCGCGCGCGAATGCGTGCTGGAAGCGCG
CGGCGTCACGAAGACGTTCGTGCAGGGCGGCTTCAACGTGCAGGTGCTCGACAACGCGCAGGTGTCGGTGCGCCGCGGCG
AGAAGCTCGCGATCGTCGGCGCGTCGGGCTCGGGCAAGAGCACGCTGCTGCACGTGCTGGGCGGGCTCGACGAGCCGAGC
GCGGGACAGGTGTCGCTGCTCGGCAAGCCGTTCACGCAGCTCGCCGAGCGCGAGCGCAACGAGCTGCGCAATCGCGCGCT
CGGCTTCGTCTATCAGTTCCACCATCTGCTGCCGGAATTCACCGCGCTCGACAACGTCGCGATGCCGCTCCGAATCCGCC
GGATGTCGACCGAGGAGGCGCGCCGGCATGCGCGCGAGATGCTCGAGCAGGTGGGGCTCGGCCCGCGCGCGAAGCATCGC
CCGGGCGAGCTGTCGGGCGGCGAGCGCCAGCGCGTCGCGATCGCGCGCGCGCTCGTGACCAAGCCCGCTTGCGTGCTCGC
CGACGAGCCGACCGGCAACCTCGACGGCTCGACCGCCGATCATGTGTTCCACCTGATGCTCGAGCTGTCGCGAACGCTCG
ACACGAGCTTCGTGATCGTCACGCACGATCCCGATCTCGCCGCGCGCTGCGACCGCATCCTGCGGCTGCGCGACGGCGTG
CTGCACGAGGAGCCGGCCGTGCCGGTGTGA

Protein sequence : 
MNDRVFEQTMNQNHQDDGARECVLEARGVTKTFVQGGFNVQVLDNAQVSVRRGEKLAIVGASGSGKSTLLHVLGGLDEPS
AGQVSLLGKPFTQLAERERNELRNRALGFVYQFHHLLPEFTALDNVAMPLRIRRMSTEEARRHAREMLEQVGLGPRAKHR
PGELSGGERQRVAIARALVTKPACVLADEPTGNLDGSTADHVFHLMLELSRTLDTSFVIVTHDPDLAARCDRILRLRDGV
LHEEPAVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001059609.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 3e-30 44
lolD YP_001059609.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 1e-35 42