Gene Information

Name : Pcal_0011 (Pcal_0011)
Accession : YP_001054917.1
Strain : Pyrobaculum calidifontis JCM 11548
Genome accession: NC_009073
Putative virulence/resistance : Unknown
Product : cytidine deaminase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0295
EC number : -
Position : 6661 - 7044 bp
Length : 384 bp
Strand : -
Note : TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: pai:PAE0794 cytidine deaminase

DNA sequence :
ATGGACGAGTTAGTAGAGGCGGCGAAGGCTGTTTTAAACAACGCCTATGCGCCCTACTCCAAGTTTAAGGTGGCTGCGGC
CGTGAAGACTAGGAGTGGGAAAGTTTATACAGGCGTAAATGTAGAAAATGCATCGTACGGCCTCACCGTGTGTGCAGAGC
GTGTCGCAATATTTAAGGCAGTCTCTGAGGGCGATAGAGACATAGAAGTTGTGGCGGTGTATGTAGACGCAGACGAGCCC
GTGGCCCCTTGTGGCGCGTGTAGGCAGGTAATAGCCGAATTTAATCCAAACGCCCTAGTGGTAATGGCCAGCCGCAACAA
GGTCAAAACAGCGAGACTTAGCGAATTACTGCCAATGGCGTTCACAGGAGAACGCCTGCGGTAG

Protein sequence :
MDELVEAAKAVLNNAYAPYSKFKVAAAVKTRSGKVYTGVNVENASYGLTVCAERVAIFKAVSEGDRDIEVVAVYVDADEP
VAPCGACRQVIAEFNPNALVVMASRNKVKTARLSELLPMAFTGERLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd YP_005163382.1 Cytidine deaminase Not tested Not named Protein 3e-17 43