Gene Information

Name : Pcal_1027 (Pcal_1027)
Accession : YP_001055918.1
Strain : Pyrobaculum calidifontis JCM 11548
Genome accession: NC_009073
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 965029 - 965757 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pai:PAE2001 glutamine transport ATP-binding

DNA sequence : 
ATGTCCGCCGTAGTCGTAGAAAACCTAGTGGTCGCATACGGCGACCACGAGGTGGTGAAGGGGGTCAGCCTCAACGTGCG
AAAGGGGGAAAAGGTTGTAATAATGGGCCCCTCTGGGTCTGGCAAGTCCACTTTCCTAAGATCGCTGATTTGGCTCGTCA
AGCCTAAGCAGGGCAGAATAGTGATAGACGGCGTCGAAGTAGGTCCGGCCACGTTGGCCAAGGTGAGGACTAGGGTGGGC
TTCGTCTTCCAGAGCTACAACCTATTCCCACACCTACGCGTAATAGACAACATCGTCCTCCCGCTCGTCAAAGTGCACAA
GCTACCGCTCAGCGAGGCGAGAGAGAGGGCAATGGAGGCGCTACAACTAGTGGGACTGTTAGACAAGGCGAATGCATATC
CGCTACAACTCTCAGGCGGCCAGCAACAGAGGGTGGCAATAGCCCGGGCACTCGCCATTAGGCCCTCGGTTCTGATGTTA
GACGAGCCGACCTCTGCCCTAGACCCAGAGCTGGTGGAGGAGGTGCTACAAGTGCTTGAGGACATCGCCAGGCGCGGCAC
CACGATGTTGATAGTCACACACGAGGTAGACTTCGCAGAAGACGTAGCAGATAGGGTGGTGTTCTTCGAAAACGGGAAAA
TAGTGGAGGAGGGGCCGCCAGAGATTTTGTACAACCCCCGCACAGAGAGGCTCAGGCAGTTTTTAAGGAGGCTACACCGG
AGGATTTGA

Protein sequence : 
MSAVVVENLVVAYGDHEVVKGVSLNVRKGEKVVIMGPSGSGKSTFLRSLIWLVKPKQGRIVIDGVEVGPATLAKVRTRVG
FVFQSYNLFPHLRVIDNIVLPLVKVHKLPLSEARERAMEALQLVGLLDKANAYPLQLSGGQQQRVAIARALAIRPSVLML
DEPTSALDPELVEEVLQVLEDIARRGTTMLIVTHEVDFAEDVADRVVFFENGKIVEEGPPEILYNPRTERLRQFLRRLHR
RI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-22 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-17 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pcal_1027 YP_001055918.1 ABC transporter NC_012469.1.7686878. Protein 2e-23 45
Pcal_1027 YP_001055918.1 ABC transporter NC_008702.1.4606598. Protein 2e-19 42