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Name : hsdM3 (APL_0633) Accession : YP_001053340.1 Strain : Actinobacillus pleuropneumoniae L20 Genome accession: NC_009053 Putative virulence/resistance : Unknown Product : type I modification enzyme Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 721030 - 722595 bp Length : 1566 bp Strand : + Note : - DNA sequence : TTGGAAAAAGCTGCCGACAAACTCCGCCAGCAATTAGACGCAGCCAACTACAAGCATATTGTGCTTGGTTTAATTTTCCT CAAATACGTTTCTGATAGTTTCACCGCACAGCGTGAACGCCTTTCTGCACAATTCCGAGATCCAAATTCTGACTACTATT TGTCAGATATAACCACCGAAGAAATCGAATCTGAACTCGAAGAACGGGATTACTACACCCAAGATAACGTGTTTTGGGTG CCTCAAATCGCCCGTTGGAACGAAATCAAAGCCGTAGTACGAGCTAATTTAGGTGACACCATTTTTGAGAACAAAACCTT TAAAGGCGTGGCAAATTTGATTGATGAAGCCTTTGACGCTATTGAAAAAGACAACCCAAAATTGAAAGGTGTGATTCAAC GTATTTCGAGCTACAACGTGGACGAAAGTATTTTAATCGGCTTAGTGGAATTGTTTTCTGACACCAACTTCACTCACCCA ACGCTTAACGGCAAGCCTGTTTCTTTGGCAGCAAAAGATATTTTAGGACATGTTTACGAGTATTTTCTCGGACAATTTGC TCTCGCAGAAGGCAAGAAAGGCGGGCAGTATTTCACGCCAAAATCTATTGTTACCCTGATCATCGAAATGCTCGAACCCT ACGAAGGGCGAATTTACGACCCTGCAATGGGATCAGGCGGTTTCTTCGTGCAAACCGAACGTTTTATCCGTGAACATCAG GGCAACCCAAACCGTGTGTCGATTTATGGGCAAGAATTTAACCCAACCACTTGGAAACTGGCTGCAATGAATATGGCAAT TCGTGGCTTGTCGTTTGATTTTGGCAAGGGCAATGCCGACACGTTTAGCAATCCACAACATCTCGATAAACGAATGGATT TTGTGATGGCGAACCCACCGTTCAATATGAACGAATGGTGGAATCAAAGCCTTGCCAACGATCCACGCTGGAAATTTGGC ACGCCACCGTCTAGCAACGCCAACTTTGCGTGGTTGCAACATATGATTTACCACCTTTCCGAAAAAGGCAAAATGGCGTT ATTGCTTGCCAACGGCTCAATGTCGAGCAACACCAACAACGAGGGCGAAATCCGCCGTAACATCGTACGAGCCGATTTGG TGGAAGCGATGATTGCCTTGCCAAGCCAATTATTTACCAATACACAAATCCCAGCTTGCATTTGGGTGCTGAACAAAGCC AAACCACGCAAGGGCGAAGTGCTGTTTATTGATGCTCGCCAACTTGGTTATATGAAAACCCGTGTAATGCGTGATTTCAC GCCAAAAGACATTGCAAGCGTAGCAGAAACCTACCACCAATGGCAAAAAGGAGAAGGTTATCAAGACGTGCCAGCATTCT GCAAATCCGCCACCCTTGCCGAGATCGAAAGCCACGATTTTGTGCTAACCCCGGGGCGATACGTTGGAGCGGCTGAGGTG GAAGATGACGGCATTCCATTTGCAGAAAAAATGCAAAATCTGACCGCACTTTTAAACGAACAATTCAAACAAGGGGCGGA ATTAGAAGCAAAAATCCGAGCGAATTTGGCAACGCTCGGGTTTTAA Protein sequence : MEKAADKLRQQLDAANYKHIVLGLIFLKYVSDSFTAQRERLSAQFRDPNSDYYLSDITTEEIESELEERDYYTQDNVFWV PQIARWNEIKAVVRANLGDTIFENKTFKGVANLIDEAFDAIEKDNPKLKGVIQRISSYNVDESILIGLVELFSDTNFTHP TLNGKPVSLAAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIIEMLEPYEGRIYDPAMGSGGFFVQTERFIREHQ GNPNRVSIYGQEFNPTTWKLAAMNMAIRGLSFDFGKGNADTFSNPQHLDKRMDFVMANPPFNMNEWWNQSLANDPRWKFG TPPSSNANFAWLQHMIYHLSEKGKMALLLANGSMSSNTNNEGEIRRNIVRADLVEAMIALPSQLFTNTQIPACIWVLNKA KPRKGEVLFIDARQLGYMKTRVMRDFTPKDIASVAETYHQWQKGEGYQDVPAFCKSATLAEIESHDFVLTPGRYVGAAEV EDDGIPFAEKMQNLTALLNEQFKQGAELEAKIRANLATLGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 5e-157 | 61 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 5e-113 | 46 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 1e-112 | 46 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-111 | 45 |
