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Name : potB (APL_0281) Accession : YP_001052994.1 Strain : Actinobacillus pleuropneumoniae L20 Genome accession: NC_009053 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 311260 - 312126 bp Length : 867 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAAGATTGCTAACAACAAATTCCAAGCCGGAACGGTTTCGGTTATCTTCGGTTGGTTGTTGCTTTTTGTACTCGTACC GAACGTATTGGTACTGTTAATCAGCTTTTTAACCGAAAACCGCCAAAGCGCATACTTTGTAGATTTCATCTTTAGCCTTG ACGCATATACGCAGTTGTTCAACGATACCTATGCAACGGTATTATGGAACTCGTTTAAAATGTCGGCGATAGCAACGTTT TTCTGTTTAATCATCGGTTATCCGTTTGCATTTATTATTGCCAAAATGCCGGCGAAAATTCGCCCGATTTTGTTATTTTT AGTCGTATTGCCGTTTTGGACAAACTCGCTGATCCGTATCTACGGCATTAAAATTTTCTTAGGCGTGAAGGGGGTATTAA ACGAGGCGTTATTGGCAATCGGCTTAATTGACGAACCGCTTCGTTTATTAAACTCCGAATTGGCGATTATTATCGGTTTA GTATATATCTTGTTACCGTTTATGATTTTACCGCTTTATTCTTCTATCGAGAAAATTGACGGTCGTTTATTAGAAGCGGC AAAAGATTTAGGTGCGAATGCGTTCCAACGTTTTGTGCGTGTAACCATTCCGCTGACAATGCCGGGGATTGTGGCAGGTT GTTTATTAGTATTATTACCGGCAATGGGAATGTTCTATGTTGCCGACTTATTAGGCGGCGGTAAAACACCGTTAATCGGT AATATTATTAAGAGCTTGTTCTTAAATACCAACCAGTTTGCATTAGGTTCGGCGGTTAGTATCGCCCTTACCGTGTTAAT GGCGTTAATGTTATATGTTTATTACCGTGCAAATAAATTATTAAATAAAAAGGTGGAGCTTGAATAA Protein sequence : MKIANNKFQAGTVSVIFGWLLLFVLVPNVLVLLISFLTENRQSAYFVDFIFSLDAYTQLFNDTYATVLWNSFKMSAIATF FCLIIGYPFAFIIAKMPAKIRPILLFLVVLPFWTNSLIRIYGIKIFLGVKGVLNEALLAIGLIDEPLRLLNSELAIIIGL VYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPLTMPGIVAGCLLVLLPAMGMFYVADLLGGGKTPLIG NIIKSLFLNTNQFALGSAVSIALTVLMALMLYVYYRANKLLNKKVELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 9e-73 | 61 |
