Gene Information

Name : yfeA (APL_0272)
Accession : YP_001052985.1
Strain : Actinobacillus pleuropneumoniae L20
Genome accession: NC_009053
Putative virulence/resistance : Virulence
Product : iron (chelated) ABC transporter, periplasmic-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 300024 - 300920 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACTTTCATTTTTAAAACAAGTATTTGTGGTTGCATTAGGTTTAAGCGCAACACTCGCTATGGCTGCGCCATTCAA
AGTCGTCACTACCTTTACCGTGATCCAAGATATTGCGCAAAATGTTGCCGGTGATAAAGCGGTTGTCGAATCCATAACTA
AGCCAGGTGCGGAAATTCATGATTACCAACCGACACCGAAAGATATTGCTAAAGCACAAAAAGCGGATCTTATCTTATGG
AACGGTATGAATTTAGAACGTTGGTTCGAGCGTTTCTTTGAAAACGTAAAAGGTAAACCGGCAGTTGTGGTGACCGAAGG
CATCACACCAATTGCAATTACCGAAGGCGAATATAAAAACTTACCGAATCCGCATGCTTGGATGTCATCGGCTAACGCTT
TGCAATATATTGAAAATATTCGCGCCGCATTAGTGAAATACGATCCGAAAAATGCCGAAAGTTATAACCAAAATGCTAAA
ATTTATGCAGAAAAAGTAAAAGCCATTGCGGAGCCATTACGCCAACGTCTATCCGTTATTCCAGAAGCACAACGTTGGTT
AGTAACCAGTGAAGGGGCATTTAGTTATTTAGCACAAGATTATCAGTTAAAAGAGCTTTATTTATGGGCGATTAATGCCG
AAGAGCAAGGCTCGCCGCAACAAGTGAAAAAAGTGATCGATGGCGTAAAAGCCAATAATATTCCCGTTGTTTTCAGCGAA
AGTACCGTATCGGATAAACCGGCGAAACAAGTGGCAAAAGAAACCGGTGCATTATACGGCGGTGTGTTATATGTCGATTC
ACTTTCAACCAAAGACGGTGCCGTACCAACTTATTTAGATCTATTAAAAGTAACGATCAGTACGATTGTTGACGGTTTTG
AAAAAAGTAAAAAATAA

Protein sequence : 
MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPKDIAKAQKADLILW
NGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAK
IYAEKVKAIAEPLRQRLSVIPEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE
STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-92 64
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-92 64
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-92 64
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-92 64
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-92 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_001052985.1 iron (chelated) ABC transporter, periplasmic-binding protein BAC0439 Protein 5e-97 69
yfeA YP_001052985.1 iron (chelated) ABC transporter, periplasmic-binding protein BAC0349 Protein 2e-92 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_001052985.1 iron (chelated) ABC transporter, periplasmic-binding protein VFG0525 Protein 2e-92 64