Gene Information

Name : APL_0271 (APL_0271)
Accession : YP_001052984.1
Strain : Actinobacillus pleuropneumoniae L20
Genome accession: NC_009053
Putative virulence/resistance : Virulence
Product : chelated iron transport system ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 299267 - 300022 bp
Length : 756 bp
Strand : -
Note : -

DNA sequence : 
ATGGTATCCATTCCTACTTCTATTTCCGTTGAAAAGCTAAGTGTCCGTTATAATAACGGGCATTTAGCCTTATATGACGT
ATCCTTCCAACTGCAAAACGGTACGATTTGCGCCCTAATCGGCGTAAACGGCGGCGGTAAATCCACACTATTTAAAAGTT
TAATGGGATTAGTTAAACCTCAAACCGGTACAATTCTGTTAAACCGAATGCCGATTCAACAAGCATTGAAACAAAATCTG
GTGTCTTATGTACCGCAAAGTGAAGAGGTCGATTGGCAATTTCCGGTTTCCGTTTACGATGTCGTTATGATGGGACGTTA
CGGTTATATGGGATTGCTACGCCGTCCTTCATCTCTTGATAAACAAAAAGTGATGCAAGCGATGGAACGAGTGGATATTT
GCCACTTGCAGCATCGCCAAATCGGTGAACTTTCCGGCGGGCAGAAAAAACGCGTGTTTCTTGCTCGAGCATTAGCGCAA
GAAAGCCAAATTATTTTGCTTGACGAGCCGTTTACCGGCGTTGATGTCAAAACCGAAAATGCCATCGTTGAATTGTTGCA
GCAACTGCGTAGCGAAGGACATTTAATTTTAGTTTCAACCCATAACTTGAACAGCGTACCTAGCTTTTGCGATCAAGTAT
TGATGATAAACCGCACCTTACTCGCTGCAGGTAAAACCGAAACCACCTTTACGACCGAAAATCTGGAAAAGGTCTTTGGC
GGCGTACTGCATTATCTCGCTAAAGATATTGGATAG

Protein sequence : 
MVSIPTSISVEKLSVRYNNGHLALYDVSFQLQNGTICALIGVNGGGKSTLFKSLMGLVKPQTGTILLNRMPIQQALKQNL
VSYVPQSEEVDWQFPVSVYDVVMMGRYGYMGLLRRPSSLDKQKVMQAMERVDICHLQHRQIGELSGGQKKRVFLARALAQ
ESQIILLDEPFTGVDVKTENAIVELLQQLRSEGHLILVSTHNLNSVPSFCDQVLMINRTLLAAGKTETTFTTENLEKVFG
GVLHYLAKDIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-71 63
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-71 63
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-71 62
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-71 62
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-71 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APL_0271 YP_001052984.1 chelated iron transport system ATP-binding protein BAC0440 Protein 3e-80 67
APL_0271 YP_001052984.1 chelated iron transport system ATP-binding protein BAC0350 Protein 9e-72 62
APL_0271 YP_001052984.1 chelated iron transport system ATP-binding protein BAC0400 Protein 4e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APL_0271 YP_001052984.1 chelated iron transport system ATP-binding protein VFG0526 Protein 8e-72 62