Gene Information

Name : glnA (APL_1941)
Accession : YP_001054624.1
Strain : Actinobacillus pleuropneumoniae L20
Genome accession: NC_009053
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2172693 - 2174108 bp
Length : 1416 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGTAAAAAGAGTATTTGATTTAATCAAAGATAACGATATCAAATTCGTAATGTTAAAATTTACCGATATCAAAGG
TAAAGAACACGGTGTTTCACTCCCGGTAAGTTTAATCGGCGACGATTTAGAAGACTTATTTGAAGAAGGTAAAATGTTCG
ACGGTTCGTCTGTTGAAGGTTGGAAAGCAATCAATAAAGCCGATATGCTTTTAATGCCAATCGCCGAAACCGCTGTTGTT
GATCCTTTCGCTCGAATCCCTACTCTTACTCTCCGCTGTAGCATCTACGATCCAAACACAATGCAATCTTACGACCGCGA
CCCGCGTTCAATCGCAATCCGTGCGGAAAACTACCTGAAATCAACCGGTATCGCCGATAGCGTAATGTTTGGTCCCGAGC
CTGAATTCTTCTTATTTGACGATGTGCGTTACAACATTGGTATGAACAACGTATCGTATAAAATTGATGATATTGAAGCG
GCTTGGAACACGAATCGTAAATATGAAGACGGCAATACAGGCTATCGCCCGCTTAAAAAAGGCGGTTACTGTGCGGTTGC
TCCGATTGATTCGGCACACGATATTCGTTCGGAAATGTGCCTAATTTTAGAAGAAATGGGCTTAGTGGTTGAAGCGCACC
ACCACGAAGTGGCGACGGCAGGTCAAAATGAAATTGCGACGAAATTTAACAGCTTAACGCTTAAAGCGGACGAAACGCAG
ATCTATAAATATGTGGTGCAAAACGTTGCGTTAGAACACGGCAAAACCGCTTGCTTTATGCCGAAACCGTTTGCAGGCGA
CAACGGTTCGGGAATGCACTGTAATATGTCATTAAGCAAAGACGGCAAAAACGTATTTATGGGTGATAAATATGCAGGTT
TATCTGAAACGGCACTTTATTATATCGGCGGTATCATTAAACACGCTAAAGCATTAAATGCGTTTACCAACCCAAGTACA
AACTCGTATAAACGTTTAGTACCGGGCTTTGAAGCGCCGGTGTTATTAGCTTATTCGGCAAGTAACCGTTCGGCATCAAT
CCGTATCCCGGCAGTGACCAGCCCGAAAGCAACCCGTGTTGAAGCGCGCTTCCCGGATCCGTTAGCAAACCCGTACCTCT
GCTTCGCCGCATTATTAATGGCGGGCTTAGACGGTGTAGTAAATAAAATCCACCCGGGCGATGCAATGGATAAAAACCTT
TATGACTTACCGCCGGAAGAACTTAAAGAAATTCCGGCAGTAGCGACTTCATTAGAGGAAGCGTTGGATTCGCTTGCAGC
TGACTATGAATTCTTAACCCAAGGCGGCGTATTTACCAAAGAATTTGTTGAAGCTTATATCAACATTCGTCGTAAAGAAG
TAGAACGTTTAAATATGACACCGCACCCGGTAGAATTTGAAATGTACTACGCATAA

Protein sequence :
MSVKRVFDLIKDNDIKFVMLKFTDIKGKEHGVSLPVSLIGDDLEDLFEEGKMFDGSSVEGWKAINKADMLLMPIAETAVV
DPFARIPTLTLRCSIYDPNTMQSYDRDPRSIAIRAENYLKSTGIADSVMFGPEPEFFLFDDVRYNIGMNNVSYKIDDIEA
AWNTNRKYEDGNTGYRPLKKGGYCAVAPIDSAHDIRSEMCLILEEMGLVVEAHHHEVATAGQNEIATKFNSLTLKADETQ
IYKYVVQNVALEHGKTACFMPKPFAGDNGSGMHCNMSLSKDGKNVFMGDKYAGLSETALYYIGGIIKHAKALNAFTNPST
NSYKRLVPGFEAPVLLAYSASNRSASIRIPAVTSPKATRVEARFPDPLANPYLCFAALLMAGLDGVVNKIHPGDAMDKNL
YDLPPEELKEIPAVATSLEEALDSLAADYEFLTQGGVFTKEFVEAYINIRRKEVERLNMTPHPVEFEMYYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-94 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_001054624.1 glutamine synthetase VFG1399 Protein 1e-105 50