|
Name : rpsN (APL_1772) Accession : YP_001054461.1 Strain : Actinobacillus pleuropneumoniae L20 Genome accession: NC_009053 Putative virulence/resistance : Unknown Product : 30S ribosomal protein S14 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0199 EC number : - Position : 2003241 - 2003546 bp Length : 306 bp Strand : + Note : located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese DNA sequence : GTGGCAAAACAATCAATGATTGCACGTGATGTTAAACGTGCTAAATTAGCTGATAAATTCTACGCTAAACGTGAAGAATT AAAGAAAATCATCTCTGATGCAAATTCTTCAGACGAAGATCGTTGGGCGGCAGTGTTAAAACTACAAACACTTCCGCGCG ATTCAAGTCCTAGCCGTCAGCGTAACCGTTGCCGCCAAACTGGTCGTCCACACGGTGTACTTCGTAAGTTTGGTTTAAGC CGTATTAAGGTACGTGAAGCTGCAATGCGCGGTGAAATTCCAGGCCTTAAGAAAGCAAGCTGGTAA Protein sequence : MAKQSMIARDVKRAKLADKFYAKREELKKIISDANSSDEDRWAAVLKLQTLPRDSSPSRQRNRCRQTGRPHGVLRKFGLS RIKVREAAMRGEIPGLKKASW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0103 | AAM75306.1 | EF0103 | Not tested | Not named | Protein | 1e-10 | 50 |
| rpsN | NP_814350.1 | 30S ribosomal protein S14 | Not tested | Not named | Protein | 2e-10 | 50 |
