|
Name : mutS (APL_1602) Accession : YP_001054291.1 Strain : Actinobacillus pleuropneumoniae L20 Genome accession: NC_009053 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1828954 - 1831548 bp Length : 2595 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGACTCAAGATCTTTCTAAGCACACGCCGATGATGGCGCAATATTTGCAACTTAAAGCGCAAAATCCTGATATTTTGTT GTTTTATCGTATGGGCGATTTTTACGAATTATTTTATGACGATGCTAAAAAAGCGGCGGCGTTGTTAGATATTTCTTTGA CCAAGCGCGGTGCATCGGCAGGCGAGCCGATTCCGATGGCGGGTGTGCCTTATCATGCGGTAGAAGGCTATTTAGCTAAA TTGGTTTCATTGGGCGAATCGGTGGCGATTTGTGAGCAAATTGGCGATCCGGCAACCAGTAAAGGGCCGGTTGAACGTAA AGTGGTACGTATCGTTACCCCCGGTACCGTAAGTGATGAAGCGTTATTACCGGAACGTCAGGACAATTTAGTCGCTGCGA TTTACGAAGAAAAAGGCGTATTTGCGATTGCCACGCTAGATATGACTTCCGGACGTTTTTTAATTACCGAATTACCAAAT AAAGAAGCACTTGCTGCCGAATTACAACGTTTACTACCGGCGGAGATTCTCTATGCGGAAGACTTTTCCGCCGCTGAAAT TTTAAATAATTATAAAGGCTTACGTCGCCGTCCGGTGTGGGAGTTTGAGTTAGTTACGGCGATTAATTTATTAAATCGCC AATTCGGTACGCAAAGTTTAGCCGGATTCGGAGTGGAAAAAGCCGTGGTGGCATTATGTGCGGCAGGTTGTGTTTTGCAT TATGCACAAGAAACGCAACGTACCGCCTTACCGCACATCAACAGTATTCATCTGGCACAAAATAGCGACACTATTTTGCT GGATGCAGCAACTCGCCGTAACTTAGAACTGACCCAAAATTTAGCCGGCGGAACGGAAAATACTTTAGCGGCAGTTTTAG ATAAATGCGTTACGCCAATGGGCAGCCGTTTGCTGAAACGCTGGATTCATCAACCGATTCGTGACCTAGAAAAACTGAAA AAGCGTCAAGATATAATTGACACTTTGCAAAAAGAACAACGTATCGAACCGCTTCAGCCGTTACTACAAAATGTCGGTGA TATGGAGCGAATCCTTGCTCGTGTTGCATTGCGCTCGGCTCGCCCGCGTGATTTAACTCATTTACGTACAGCCTTGGCTC AATTGCCTGATATTGCAAAAAATGCGAAAAATTTGACCGCTTCGCTTGATGCACTTGTGGCACAAATAGGCGATTTCAGC GAATTACACGCACTGCTTAAGCGTGCGATTATTGAAACGCCTCCACAATTAATTCGTGACGGCGGTGTGATTGCAGAAGG TTACAATGCGGAGTTGGACGAATGGCGAGAGCTTTCTGCCGGTGCAACGCAATATTTGGAAAATCTCGAAATTCGAGAAA GAGAAGCAACCGGTATTGATACGCTAAAAATCGGCTTTAATGCAGTACACGGCTACTATATTCAAATTAGCCAAGGGCAA GCGCATAAAGCCCCTATGCACTACGTGCGCCGCCAAACTCTGAAAAATGCCGAGCGTTATATTATTCCCGAGCTGAAAAC TTATGAAGATAAGGTGCTGAAAGCAAAAGGTGCGTCATTGGCGTTAGAAAAGCAACTTTATGATGAGTTGTTCGACTTAC TGATGCCGCGCTTGGGCGAAATGCAATTAGCGGCGATGGCGTTATCCGAATTAGACGTACTGACCAATCTTGCAGAACGT GCGGAAAGTTTGAACTATGTGCGTCCGACGTTCAGCTTACAACGAGGTGTGAATATCAAAGGCGGTCGCCATCCGGTGGT GGAACAAGTGTTAAAAGATCCGTTTATTGCCAATCCGGTATTCTTAAACGCACAACGTCATTTATTGGTGGTAACCGGCC CGAATATGGGCGGTAAAAGTACCTATATGCGTCAAATCGCATTGATCAGCCTAATGGCGTATATCGGCAGTTTTGTGCCG GCGGACAGTGCGGAAATCGGTGCGTTAGACCGCATCTTTACTCGTATCGGCGCAAGTGATGATTTAGCCTCGGGGCGTTC AACCTTTATGGTGGAAATGACCGAAATGGCGAATATTCTGCATCAGGCAACCGAAAAAAGCTTAGTGCTGATCGATGAAA TCGGGCGTGGTACTTCCACTTATGACGGTTTATCGCTGGCGTGGGCGTGTGCCGAATGGTTAGCCAAGAAAACCCAATCG CTCACCTTATTTGCGACGCACTATTTTGAGCTGACCAGTCTGCCGAGTCAGTTAAAAGGCGTGGCGAATGTGCATTTAGA TGCTCGAGAACATCAGGATTCCATCGTGTTTATGCACAGCGTACAAGAAGGTGCGGCAAGTAAAAGTTACGGTTTGGCGG TAGCGGCGCTTGCCGGTGTGCCGAAACAGGTGATTCAATTGGCGAAACAGCGTTTAGCGCATTTGGAAGAAATCTCATTA CAAACCAAAGAAGCACACGACAACCCGCAAGGTGATTTATTATTCGCTGCGGATTTGCAAGAAACGCCGCAAATTCAACC GCTTGTTGCACAACAAAGCGAACTGGAAAAAGCATTAATAAGCATAGACCCCGATGAACTCACCCCTCGCCAAGCGTTGG AAGCGTTATATCGTTTGAAGAAATTAATGGCTTAA Protein sequence : MTQDLSKHTPMMAQYLQLKAQNPDILLFYRMGDFYELFYDDAKKAAALLDISLTKRGASAGEPIPMAGVPYHAVEGYLAK LVSLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVSDEALLPERQDNLVAAIYEEKGVFAIATLDMTSGRFLITELPN KEALAAELQRLLPAEILYAEDFSAAEILNNYKGLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCVLH YAQETQRTALPHINSIHLAQNSDTILLDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDLEKLK KRQDIIDTLQKEQRIEPLQPLLQNVGDMERILARVALRSARPRDLTHLRTALAQLPDIAKNAKNLTASLDALVAQIGDFS ELHALLKRAIIETPPQLIRDGGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGEMQLAAMALSELDVLTNLAER AESLNYVRPTFSLQRGVNIKGGRHPVVEQVLKDPFIANPVFLNAQRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVP ADSAEIGALDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKTQS LTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAALAGVPKQVIQLAKQRLAHLEEISL QTKEAHDNPQGDLLFAADLQETPQIQPLVAQQSELEKALISIDPDELTPRQALEALYRLKKLMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_001054291.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 68 |
