Gene Information

Name : cpxB (APL_1584)
Accession : YP_001054273.1
Strain : Actinobacillus pleuropneumoniae L20
Genome accession: NC_009053
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 1811593 - 1812390 bp
Length : 798 bp
Strand : +
Note : pubmed:9169799

DNA sequence : 
ATGCAATACGGTGATCAAACAACTTTCCGCCAATCTCTCGCCATTCAAGGGAGAGTAATCGGTGCATTACTCATGCGGGA
AATTATTACGCGTTACGGACGAAAAAATTTGGGTTTTTTATGGCTGTTTGTTGAGCCGCTATTACTCACTTTATTTATCG
TTTTGATGTGGAAATTTATCCGAGCGGATCGCGTTTCCGATTTAAATATTATTGCTTTTGTGATTACCGGTTATCCAATG
GCCATGATGTGGCGTAATGCGTCAAACCGCACTATCGGTGCAATTTCCGGTAACTTGAGTCTTCTTTATCATCGTAATGT
TCGCGTATTAGATACCTTACTGGCTCGTGTCATACTTGAAGTAGCAGGTGCAACGATTGCCCAAATCATTATTATGGCAT
TAGTCATTTTATTAGGCTGGATAGAAATGCCGAAAGATACGTTTTATATGGTTATGGCGTGGGTATTAATGGCATTTTTT
GCATTAGGATTAGGCTTGATTATTTGTTCTATTGCACAAAAATTTGAAGCATTTGGCAAAATCTGGGGAACATTAAGCTT
TGTTCTTTTACCTCTTTCAGGCGCATTTTTCTTTGTGCATGCGCTACCAAGCCAAGCTCAACAATATGCAACCTTAATAC
CGATGATTCACGGCACGGAAATGTTTCGTCACGGTTATTTTGGCGACAGTGTTATCACATATGAAAGTATAAGCTATCTC
GTAATATGTGATGTAGCCATGTTACTTTTTGGGCTCATTATGGTAAAAAACTTCAGTAAAGGAATCGAACCGCAATGA

Protein sequence : 
MQYGDQTTFRQSLAIQGRVIGALLMREIITRYGRKNLGFLWLFVEPLLLTLFIVLMWKFIRADRVSDLNIIAFVITGYPM
AMMWRNASNRTIGAISGNLSLLYHRNVRVLDTLLARVILEVAGATIAQIIIMALVILLGWIEMPKDTFYMVMAWVLMAFF
ALGLGLIICSIAQKFEAFGKIWGTLSFVLLPLSGAFFFVHALPSQAQQYATLIPMIHGTEMFRHGYFGDSVITYESISYL
VICDVAMLLFGLIMVKNFSKGIEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 4e-97 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpxB YP_001054273.1 capsule polysaccharide export inner-membrane protein VFG0697 Protein 2e-97 77
cpxB YP_001054273.1 capsule polysaccharide export inner-membrane protein VFG0685 Protein 2e-97 77
cpxB YP_001054273.1 capsule polysaccharide export inner-membrane protein VFG0257 Protein 2e-97 75
cpxB YP_001054273.1 capsule polysaccharide export inner-membrane protein VFG2564 Protein 1e-49 43