Gene Information

Name : cpxC (APL_1583)
Accession : YP_001054272.1
Strain : Actinobacillus pleuropneumoniae L20
Genome accession: NC_009053
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3524
EC number : -
Position : 1810436 - 1811593 bp
Length : 1158 bp
Strand : +
Note : pubmed:9169799

DNA sequence : 
ATGGAAACAACTATTACGGCAAGTCCGACAGAAAAACTACAAAAACCGGTTAAACAGAAAAAAAGTTGGTTAAAAAAGCT
TAATCCGTTATTTTGGGTAACTGTAGCGATTCCTACGGTATTATCAGCCTTTTATTTCGGTTCTGTTGCTTCCGATATTT
ATATTTCGGAATCAAGCTTCGTTGTAAGATCTCCTCAAAATCAGACCGCTTTAACCGGTGTCGGTGCCTTATTACAAGGT
TCCGGATTTTCTCGAGCTCAAGATGATACTTATACCGTACAAGAATATATGCATTCTCGTACGGCACTAGAACAGTTAAT
GAAAGACTTGCCAATACGTGAATACTATGAGAATCAAGGCGATATTATCGCTCGCTTTAATGGATTTGGTTTAAATAATA
GTAAAGAAGCGTTTTATAAATATTTCCGAGATCGCTTAAGTGTGGACTTTGACTCTGTTTCCGGTATCGCCAGCTTACGT
ATTCGAGCATTTAACGCGGAAGAGGGGCAACAAATTAATCAAAAATTACTTGCCGAAGGTGAAACGCTTATTAACCGTTT
AAACGAACGTGCAAGAAAAGATACCATTTCATTTGCGGAACAAGCGGTTACAGAAGCGGAAAATAATGTAAACGAAACGG
CAAATGCTTTAAGTAAATACCGTATCAAAAATAAAATCTTTGATTTACCGGCACAATCCGGCGTACAACTTTCATTAATT
TCCAGCCTAAAAAGCGAATTGATTCGTGTAGAAACACAATTGGCTCAATTGCAATCTATTACACCGGACAACCCACAAGT
TGATGCATTGCTTATGCGCCAAAAAAGTTTACGTAAGGAAATCGATGAGCAATCAAAACAGCTTTCCAGTAACAGTAATA
GCTCTATTGCTATTCAAACTGCCGATTACCAACGCTTAGTACTTGCAAACGAGCTGGCACAGCAACAATTGACCGCAGCA
TTAACCTCATTACAAAATACGAAAAATGAAGCGGATCGCCAGCAACTTTATTTAGAAGTAATCAGTCAGCCAAGCAAACC
GGACTGGGCGGAAGAGCCTTATCGCTTATATAATATTTTAGCGACATTCTTTATCGGTCTGATGCTTTATGGTGTATTAA
GTTTATTAATTGCAAGCGTAAGAGAGCACAAAAACTAA

Protein sequence : 
METTITASPTEKLQKPVKQKKSWLKKLNPLFWVTVAIPTVLSAFYFGSVASDIYISESSFVVRSPQNQTALTGVGALLQG
SGFSRAQDDTYTVQEYMHSRTALEQLMKDLPIREYYENQGDIIARFNGFGLNNSKEAFYKYFRDRLSVDFDSVSGIASLR
IRAFNAEEGQQINQKLLAEGETLINRLNERARKDTISFAEQAVTEAENNVNETANALSKYRIKNKIFDLPAQSGVQLSLI
SSLKSELIRVETQLAQLQSITPDNPQVDALLMRQKSLRKEIDEQSKQLSSNSNSSIAIQTADYQRLVLANELAQQQLTAA
LTSLQNTKNEADRQQLYLEVISQPSKPDWAEEPYRLYNILATFFIGLMLYGVLSLLIASVREHKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrB NP_273136.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 3e-87 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpxC YP_001054272.1 capsule polysaccharide export inner-membrane protein VFG0698 Protein 1e-105 78
cpxC YP_001054272.1 capsule polysaccharide export inner-membrane protein VFG0686 Protein 1e-105 78
cpxC YP_001054272.1 capsule polysaccharide export inner-membrane protein VFG0256 Protein 1e-87 59