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Name : cpxD (APL_1582) Accession : YP_001054271.1 Strain : Actinobacillus pleuropneumoniae L20 Genome accession: NC_009053 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 1809226 - 1810410 bp Length : 1185 bp Strand : + Note : pubmed:9169799 DNA sequence : ATGAAACTCATCAAACTTAGATTACTCCTTTCTTTGGGGCTGGTTGCTAGTTTGGCTGCCTGCTCAAGCTTACCCACTTC AGGCCCTAGCCATAGTGCGATTTTAGAGGCTAATTCCCAGAACTCAGATAAACCTTTACCGGAAGTTAATTTAGTGGAGT TAGATAATGGCTTAGTTCAGCAGTTGTATCAGACTCAGCAAAGTCAGCAATTTTCCGGCTTTTTAGGCACGGCTGGCGGT GCTGGATATGCCGGTGCGGTCAATGTGGGGGATGTTCTTGAAATTTCAATTTGGGAAGCGCCACCGGCAGTGTTGTTTGG CGGTACTTTTAGTTCTGAAGGGCAAGGTAGCGGGCATTTAACGCAATTACCGGCGCAAATGGTTAACCAAAACGGTACGG TTACTGTGCCGTTTGTGGGTAATATTCGTGTTGCAGGTAAAACACCGGAAGCGATTCAGTCTCAAATTGTTGGGGCATTG CAACGTAAAGCGAATCAGCCACAAGTATTAGTAAAAATTGCGAATAATAACTCTGCGGATGTTACGGTTATTCGTCAGGG TAACAGTATTCGTATGCCGCTGAGTGCGAATAACGAACGTGTGTTAGATGCTGTTGCAGCAGTAGGCGGTACAACTGAAA ATATTGAAGACGTTACCGTAAAATTAACTCGTGGCTCGCAAGTCAAAACATTAGCGTTTGAAACTCTAATTTCCGATCCG GCGCAAAATATTATGTTACGTGCCGGCGATGTCGTTTCGTTGCTAAACACGCCTTATAGCTTTACCGGTTTAGGTGCGGT GGGTAACAACCAGCAAATGAAATTCTCAAGTAAAGGAATTACGCTTGCCGAAGCTATCGGTAAGATGGGTGGCCTAATTG ATACTCGTTCGGATCCGAGAGGGGTATTCGTCTTCCGTCATGTGCCTTTTTCTCAATTAAGTTTAGATCAGCAAACACAA TGGGGAGCGAAAGGCTATGGTATGGGTATGGATGTACCGACGGTTTATCGTGTGAATTTACTTGAGCCGCAATCACTGTT TTTATTACAACGCTTCCCGATGCAAGATAAAGATATTGTCTATGTATCAAATGCACCGTTGTCCGAATTCCAAAAATTCT TGAGAATGATTTTCTCGATTACTTCGCCGGTTACAAGTACGACTAATGCTATTCGTGCCTATTAA Protein sequence : MKLIKLRLLLSLGLVASLAACSSLPTSGPSHSAILEANSQNSDKPLPEVNLVELDNGLVQQLYQTQQSQQFSGFLGTAGG AGYAGAVNVGDVLEISIWEAPPAVLFGGTFSSEGQGSGHLTQLPAQMVNQNGTVTVPFVGNIRVAGKTPEAIQSQIVGAL QRKANQPQVLVKIANNNSADVTVIRQGNSIRMPLSANNERVLDAVAAVGGTTENIEDVTVKLTRGSQVKTLAFETLISDP AQNIMLRAGDVVSLLNTPYSFTGLGAVGNNQQMKFSSKGITLAEAIGKMGGLIDTRSDPRGVFVFRHVPFSQLSLDQQTQ WGAKGYGMGMDVPTVYRVNLLEPQSLFLLQRFPMQDKDIVYVSNAPLSEFQKFLRMIFSITSPVTSTTNAIRAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrA | NP_273135.1 | capsule polysaccharide export outer membrane protein | Not tested | IHT-A | Protein | 3e-87 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cpxD | YP_001054271.1 | capsule polysaccharide export protein | VFG0687 | Protein | 2e-128 | 79 |
| cpxD | YP_001054271.1 | capsule polysaccharide export protein | VFG0699 | Protein | 2e-128 | 79 |
| cpxD | YP_001054271.1 | capsule polysaccharide export protein | VFG0255 | Protein | 1e-87 | 59 |
| cpxD | YP_001054271.1 | capsule polysaccharide export protein | VFG2566 | Protein | 1e-65 | 44 |
