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Name : apxID (APL_1442) Accession : YP_001054131.1 Strain : Actinobacillus pleuropneumoniae L20 Genome accession: NC_009053 Putative virulence/resistance : Virulence Product : RTX-I toxin secretion component Function : - COG functional category : V : Defense mechanisms COG ID : COG1566 EC number : - Position : 1649278 - 1650714 bp Length : 1437 bp Strand : - Note : - DNA sequence : ATGAAAACATGGCTAATGGGTTTATATGAGTTTTTCCAACGCTATAAAACGGTTTGGACGGAGATCTGGAAAATTCGTCA TCAATTGGATACGCCGGATCGAGAAAAGGATGAAAATGAATTTTTACCTGCACACTTAGAGCTGATTGAAACACCGGTGT CAAAAAAACCGAGATTGATCGCTTATTTAATTATGCTGTTCCTATTTTTGGCATTAGTTATTTCAATTGTCAGTCACGTA GAAATTGTGGCGACCGCAACGGGCAAATTAGCGTTTAGCGGACGTAGCAAAGAAATTAAGCCGATTGAAAACGCCTTGGT TAAAGAAATCTTTGTGCAAGACGGACAATTTGTTGAGAAAGATCAGTTGCTGTTACACTTGACCGCATTGGGAGCCGATG CGGATCAACAAAAAACCAAAAGTTCGTTATCGCTGACTAAATTGGAACGTTATCGTTATGAAATTTTATTAGAGGCGGTT GCGGCGGATAGGTTGCCGCTCATTGAACTGACAAAGGATGAATTTAAACATGCTACGGAAGAAGATAAAACCAGAATTCG CTATTTGATCACCGAGCAATTTGAAGCTTGGCAAAAGCAAAAGTATCAAAAAGAATTAGCTTTGCAACGTAGAGAAGCAG AAAAACAAACGGTTCTAGCTAATATTCGTAAATATGAGGGAATCAGTCGAGTTGAAAATGAAAGATTAAAAGATCTTAAA AAATTATTTAATTCGAAATCGACTTCTAAACATGATGTCTTGACTCAAGAAAATCGTCATATCGAAGCGGTAAATGAGTT GGCGGTGTATAAATCTCGGTTGAATGAAGTGGAAAGTGACTTACGTCAAGCCAAAGAGGAAATACATTTAATAACTCAGT TGTTTAGAGCCGATATTCTGGAGAAGTTGAAACAAAATGTTGAAGCGGAGAAACAGCTTTCGCTCGAATTAGAAAAAAAT GAGCAGCGTCAAATTGCTTCGGTGATTCGTGCGCCGGTTTCCGGTACGGTTCAGCAACTTAAAACCCATACGGTAGGCGG CGTCGTGACGACTGCCGAAACCTTGATGGTAATTGCTCCGGAAGATGATGTTTTAGAGGTAACGGCGTTAATTCAAAATA AGGATATTGGTTTTATCGAGGTCGGTCAGGATGCGGTGATTAAAGTAGAAACTTTTCCTTATACTCGTTACGGCTATTTA ATGGGTAAAGTAAAAAATATCACGCTGGAAGCCATCGAACATCCGCAACTCGGCCTAGTTTTTAACTCGATTATTTCTAT TGATAGAAAAACTTTATCCGGCAAAGACGGCAAAGAAATTGAACTTGGATCAGGTATGAGTGTGACGGCGGAAATTAAAA CTGGAGAACGTAGCGTTATTAGTTATTTACTCAGTCCGTTGGAAGAATCCGTTTCGGAGAGTTTAAGAGAACGCTAA Protein sequence : MKTWLMGLYEFFQRYKTVWTEIWKIRHQLDTPDREKDENEFLPAHLELIETPVSKKPRLIAYLIMLFLFLALVISIVSHV EIVATATGKLAFSGRSKEIKPIENALVKEIFVQDGQFVEKDQLLLHLTALGADADQQKTKSSLSLTKLERYRYEILLEAV AADRLPLIELTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQRREAEKQTVLANIRKYEGISRVENERLKDLK KLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKEEIHLITQLFRADILEKLKQNVEAEKQLSLELEKN EQRQIASVIRAPVSGTVQQLKTHTVGGVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYL MGKVKNITLEAIEHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYLLSPLEESVSESLRER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyD | CAD33761.1 | Hemolysin D | Virulence | PAI I 536 | Protein | 3e-144 | 64 |
| hlyD | CAD42037.1 | HlyD protein | Virulence | PAI II 536 | Protein | 3e-144 | 64 |
| hlyD | NP_755449.1 | hemolysin D | Virulence | PAI I CFT073 | Protein | 4e-144 | 64 |
| hlyD | AAC61717.1 | chromosomal hemolysin D | Virulence | PAI I CFT073 | Protein | 3e-128 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| apxID | YP_001054131.1 | RTX-I toxin secretion component | VFG1556 | Protein | 2e-144 | 64 |
| apxID | YP_001054131.1 | RTX-I toxin secretion component | VFG0908 | Protein | 2e-144 | 64 |
| apxID | YP_001054131.1 | RTX-I toxin secretion component | VFG1502 | Protein | 2e-144 | 64 |
| apxID | YP_001054131.1 | RTX-I toxin secretion component | VFG0843 | Protein | 9e-106 | 50 |
