Gene Information

Name : Sbal_0083 (Sbal_0083)
Accession : YP_001048487.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Virulence
Product : two component, sigma54 specific, Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 93928 - 95358 bp
Length : 1431 bp
Strand : +
Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: shm:Shewmr7_3966 two component, sigma54 specific, tr

DNA sequence : 
GTGCTAGAATTGGTCGCAAATGAGTCAAAATGTCCAGAAGCAGACAATATGAGCCAGATAGATAATAACCTCAAGCCTCT
TCCATCGGCAGTATCGGTACTGATTGTTGATGATGAACCCGGAATGCGCAGTTTTTTAAATAAGGCACTCTCGAAAAAAT
TCGCCTTAGTCGAAACAGCAGGCAGTATCGAAGATGCGGAGCAGCTACGTAGCCGCTGCCATTTCGATTTGCTGATCGTC
GACATTCGCTTGCCAGGCCGCTCAGGTATCGAATGGCATGAAGCGCTTGATGAGCAGGGTCGTCGTTCGGACATCATTTT
TATGACCGGCTATGCCGACATGGAAGTGGCGATTACTGCGCTGCGCGCGGGTGCGTCTGACTTCATCATGAAACCTTTCC
ACCTTGAGCAGATGATGACAGCGGTCGATCGTTGTATCGAACGTCGCCTGCTTAAACGTGAAAACTTGATGCTGCGCCGT
GAGGTTTCAATCGGTTACTCATCGACCATAATTGGCAGCAGTGAGGCCATGAAGTCGGTGAAACATATTATCGAACGTGT
GGCGCCGACCAATGCCGTGGTGTTGATCCAAGGTGAGTCGGGCACGGGTAAGGAATTAGTTGCACGGCAATTACATTTGC
TCAGTGGACGTCAGGGACCTTTTGTCCCGGTCAACTGTGGCTCTATCGCTCCTGAATTGCTCGAAAGTGAGCTGTTTGGT
CATACCGCAGGTGCATTTACGGGTGCGAAAGGCAATCGTGAAGGTTTATTCAGTTTTGCCTCGGGCGGGACGATTTTCCT
CGATGAAATTGGCGAAATGCCACTGAAAATGCAAACGGCATTGCTCAGAGTATTAGAGCAAAAAGCGATTCGCCCAGTGG
GCAGCGAGAAAGAAGTGAACATCGATGTGCGAGTGATCGCGGCCACCAACCGCACTCTGATTGATGAAGTGGATGCGGGG
AATTTCCGCCGTGACTTATATTATCGACTGAATGTGCTCGATATTTTAATCCCGCCATTACGTGACAGACCCGAAGATGT
GGTCGAGTTAACCCATCACTTCACCCGTCAACTCGCCGCCGAATTAGGGGTTAGAGAAGTCGTGTGGAGCCATGAGGACA
TGGTGAAGTTGCAACAACACGAGTGGCCAGGCAATATTCGCGAGCTGCGCAATATGATTGAGCGCTGTATTTTGCTGGGC
AAACCGCCGGCGGAATATTGGAAACAACAGCTGAAGAGTGAGTCTTTATCGACATCGGGTTACCCATTGGATTGGCCATT
AAAAGAAGTCGAAAAACACCATGTGACCAGCGTTGTGGACTTACATTCTGGCAATAAGTCTGCCGCAGCGAGGGATTTAG
GCGTTTCGCGTAAAACTTTAGATCGTAAGTATAAAGAGTGGTTTGATTTCAGCGGCGATCAGGAGTCATAG

Protein sequence : 
MLELVANESKCPEADNMSQIDNNLKPLPSAVSVLIVDDEPGMRSFLNKALSKKFALVETAGSIEDAEQLRSRCHFDLLIV
DIRLPGRSGIEWHEALDEQGRRSDIIFMTGYADMEVAITALRAGASDFIMKPFHLEQMMTAVDRCIERRLLKRENLMLRR
EVSIGYSSTIIGSSEAMKSVKHIIERVAPTNAVVLIQGESGTGKELVARQLHLLSGRQGPFVPVNCGSIAPELLESELFG
HTAGAFTGAKGNREGLFSFASGGTIFLDEIGEMPLKMQTALLRVLEQKAIRPVGSEKEVNIDVRVIAATNRTLIDEVDAG
NFRRDLYYRLNVLDILIPPLRDRPEDVVELTHHFTRQLAAELGVREVVWSHEDMVKLQQHEWPGNIRELRNMIERCILLG
KPPAEYWKQQLKSESLSTSGYPLDWPLKEVEKHHVTSVVDLHSGNKSAAARDLGVSRKTLDRKYKEWFDFSGDQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-62 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-62 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_0083 YP_001048487.1 two component, sigma54 specific, Fis family transcriptional regulator BAC0089 Protein 2e-67 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_0083 YP_001048487.1 two component, sigma54 specific, Fis family transcriptional regulator VFG1214 Protein 1e-67 42