Gene Information

Name : Sbal_0656 (Sbal_0656)
Accession : YP_001049054.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 744347 - 745156 bp
Length : 810 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: sdn:Sden_3021 integrase, catalytic region

DNA sequence :
ATGAGTGTCAGTAAGTCAGGCTATTACGATTGGCATAAACGCCCTGCAAACGTGATAAGCCTTGAAACACTGAAGCTTTA
TCGCCTTGTTAGACAGCTATTTAAGCAAAGTCGAGGCAGCTTAGGAAATCGTGAAATGGTGAAGAAATTGCGCAAGGAAG
GCTACCAGGTTGGTCGCTATCTCGTTCGTAAAATTATGCACCGCCTTCGACTCAAAGCAACCCAGCGACGCGCTTACAAG
GTGACGACACAGCGAAAACACTCAGATGCAGTGGCAGATAACCTGCTAAACATGAACTTTAACCCCGTATCGGCTAATGA
GGTTTGGGCGGGTGACGTGACCTATTTAAAGACGGGTGAGGGCTGGATGTATTTAGCTGTGGTGATGGATTTATATTCAC
GCCGGATTGTGGGATGGCACATAGACAAACGCATGACCACGGATTTGATATCTAAGGCATTAATAAAAGCCTACAACCTG
CGCCAACCGGCCAGAGGGCTGGTATTTCACAGTGACCGAGGCTCGCAATATACCAGTAAGCAATTCGGTAGGCTGCTATT
GAGCTATGGTATCCGAGCCAGCATGGGTGATGTGGGAGCGTGTTGGGATAATGCCGTTGTTGAGCGATTCTTTGGCAGCT
TAAAACACGATTGGATTTTTAAAGTTAATCAACCAACAAGGGAGTTTATGAAGCAAGATGTGACTGCTTACATGAAATAT
TACAACTTGGAGCGACTTCATTCTGCTAATGGTGATCTGTCACCTGTAGAGTTTGAAAATTCTCAACTAAAAGTGTCCAG
TTTGGGTTGA

Protein sequence :
MSVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKATQRRAYK
VTTQRKHSDAVADNLLNMNFNPVSANEVWAGDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLLSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
YNLERLHSANGDLSPVEFENSQLKVSSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 3e-38 42
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-38 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-37 41
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-37 41
unnamed CAI43898.1 putative transposase Not tested LEE Protein 3e-37 41
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 3e-37 41
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 2e-35 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_0656 YP_001049054.1 integrase catalytic subunit VFG1484 Protein 1e-35 41