Gene Information

Name : hemC (Sbal_4000)
Accession : YP_001052336.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4688407 - 4689339 bp
Length : 933 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTCTGAGAACCGCATACGTATCGCAACCCGCAAGAGTCCGCTGGCCATGTGGCAAGCTGAATTTGTTAAAGCCGAATT
AGAACGCATTCACCCAGGTATTGTGGTGGAATTGCTGCCAATGAGCACTAAAGGCGACGTTATCTTAGATACGCCGCTAG
CCAAAGTGGGCGGTAAAGGTTTGTTCGTCAAAGAGCTTGAAGTCGCTATGTTAGACGATCTTGCCGATATCGCCGTGCAC
TCAATGAAAGACGTGCCCGTCGACTTCCCAGAAGGCTTAGGCCTTGAAGTGATTTGCGAGCGCGAAGATCCCCGCGATGC
CTTTGTATCGAATTTATATAAATCGATCAGCGAATTACCATTAGGCGCAACTGTGGGCACCTCGAGCCTACGTCGTCAAT
GTCAGATACGTGCATCACGTCCCGACCTCATCATCAAAGATTTACGCGGTAACGTTGGAACTCGTTTAGCTAAGCTTGAT
AACGGCGAATACGATGCCATTATTCTTGCCGCTGCAGGCTTAATCCGTCTGAAATTGTCTGAGCGTATTGCCAGCTTTAT
TTCTGCCGAAGAATCCTTACCCGCCAACGGCCAAGGCGCTGTGGGTATCGAATGTCGCATCAACGACGAACGTGTTAAAG
CGCTACTGGCGCCATTAGAGCATTTAGAAACTCGCTACCGTGTTCTTGCCGAGCGCGCGATGAACACTCGCCTTGAAGGT
GGATGCCAAGTGCCGATTGGCGCATTTGCTGAAATCGATGGTGACGAGATGACGCTACGCGGCCTAGTCGGTAACCCAGA
TGGCAGTGAAATCATCGAAGGCGTGATCACAGGTCCAAAAACCGAAGCCACGCAATTAGGGGTTGCCCTTGCTGAAGAGT
TACTCAGCAAAGGTGCCAAAACCATTCTCGACGCCGTTTACGCTAAAGCCTAA

Protein sequence :
MSENRIRIATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVKELEVAMLDDLADIAVH
SMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISELPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLD
NGEYDAIILAAAGLIRLKLSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRLEG
GCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKGAKTILDAVYAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-71 60
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-71 60