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Name : fliP (Sbal_3984) Accession : YP_001052321.1 Strain : Shewanella baltica OS155 Genome accession: NC_009052 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 4673048 - 4673782 bp Length : 735 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGATAGTTCGGGTATTGCTACTGTCTATTTTATTGTTTGCTCCCCAGGCCCTCGCATCGGAAGGACTCACTTTATTCAC TCTAGATAGTGCTCAAGACAGTCAAGCAGTTAACATTAAGCTCGAAATTTTAGCACTCATGACGGCTATTAGTTTCCTGC CCATCATGTTGATGATGCTGACAAGCTTTACCCGTATTATCATTGTGTTAGCTATTCTTCGGCAAGCGCTTGGACTACAG CAAAGCCCTCCTAATCGCGTGCTTGTGGGGATAGCGTTAATACTCACTATCTTTATTATGCGACCAGTAGGAGACAAGAT TTATAAAGAAGCTTACTTGCCCTATGACCAAGGTAAGATCGAATTGATGGAAGCAGTCTCGATTGCAAAAGTCCCATTGA CTCGATTTATGCTGGCGCAGACAAGGGCGACTGATCTTGAGCAAATGCTGAAAATAGCTAACGAGCCCACACACATGAAA ACGGCTGAGGAAGTACCATTTTTTGTCCTTATGCCAGCTTTTGTGCTGAGTGAACTCAAAACAGCTTTCCAAATCGGCTT CTTACTTTTCTTACCTTTCTTGGTTATCGATCTAGTTGTCGCAAGTGTCCTCATGTCTATGGGGATGATGATGTTGTCAC CTTTGATTATCTCCCTCCCATTTAAATTGATGGTTTTTGTATTAGTCGATGGATGGTCTATGACAGTAAGCACCTTAACC GCAAGTTTTGGGTAG Protein sequence : MIVRVLLLSILLFAPQALASEGLTLFTLDSAQDSQAVNIKLEILALMTAISFLPIMLMMLTSFTRIIIVLAILRQALGLQ QSPPNRVLVGIALILTIFIMRPVGDKIYKEAYLPYDQGKIELMEAVSIAKVPLTRFMLAQTRATDLEQMLKIANEPTHMK TAEEVPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLT ASFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-22 | 44 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 4e-18 | 43 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 4e-18 | 43 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 4e-18 | 43 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-25 | 42 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-26 | 42 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-26 | 42 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-26 | 42 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-26 | 42 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-25 | 42 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-26 | 41 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-26 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 1e-20 | 41 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 1e-21 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 1e-20 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-20 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 1e-20 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 1e-20 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 1e-20 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001052321.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-45 | 60 |
| fliP | YP_001052321.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 5e-42 | 57 |
| fliP | YP_001052321.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 6e-43 | 56 |
| fliP | YP_001052321.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 6e-46 | 53 |
| fliP | YP_001052321.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 7e-22 | 41 |
| fliP | YP_001052321.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 2e-21 | 41 |
