Gene Information

Name : Sbal_3976 (Sbal_3976)
Accession : YP_001052313.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 4664384 - 4665733 bp
Length : 1350 bp
Strand : -
Note : KEGG: sdn:Sden_3656 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase

DNA sequence : 
ATGAGGTTGAGATTGGAGTCTGATGTATTTCATGACGATTGGCCTCAGGTTCCAGTTGCAAGGGTTTATGGACGTCTCAT
TCGAGTCAATGGTTTGTTGCTTGAGGCCGTTGGCTGTCAGCTTGGCATGGGTGACCGTTGTCAGATTGAAGGGCGAAATG
GGCGTTTAATTGAGGCAGAAGTTGTTGGTTTTCACCGTGACGTATTGTGCCTTATGCCGATTGAGCCTACACAGGGCTTG
ATGCCAGGCGCCAGAGTGCTACCTATTACGGATGAGCAAACGATAGCTATCGGTGATGGATTGCTTGGTAGGGTGCTTGA
TGGGCTTGGGCAGCCACTAGACTCACTGGGCGACCTCACTGACATTTCACAAGTTCCGCAATCCCATACGAGTTACAACC
CTTTGCTGCGCCAGCCTATCCGTCAGCCGCTTGATGTGGGGATCCGTGCCATTAATAGTCTGTTGCCCATTGGCAGAGGT
CAGCGACTTGGGCTCTTTGCGGGCTCGGGTGTGGGTAAGAGTGTGTTATTAGGCATGATGACCCGCTTTACTGAGGCCGA
TGTCGTGGTGGTTGGCCTGATTGGTGAGCGTGGTCGTGAAGTTAGAGAGTTTATTGAAGAAACACTCGGTGAAGAAGGGC
GTAAACGCGCCGTGATTATCGCAGCTCCTGCGGATACCACACCGCTGATGCGATTACGTGCTATGCGGTTATCCCACTCC
ATTGCCTGTGCTTTTAGAGATCAAGGTAAGCAAGTGTTGCTATTAGTCGACTCATTGACTCGTTATGCTCAGGCACAGCG
TGAAATCGCCCTGAGTCTAGGTGAGCCACCTGCAACCAAAGGCTATCCGCCATCGGCATTTGCACAGTTACCTAGACTGG
TTGAAATGGCGGGTAATGGTGAGCACCCAACGGGAACGCTAACCGCGTTTTATACCGTATTGGCCGAGGGTGATGATCAG
CAGGACCCTGTTGCTGACGCAGCTAGAGCCATTTTAGATGGCCATATAGTGCTAAGTCGTAAATTAGCCGAGCAAGGACA
TTTTCCAGCGATTGATATTAATGCGTCAGTGAGTCGCTTAGCCATGCACATAGCGACTTCTAGCAGCATTGAACAAAGTC
AGATCTTTAGACATCTTTTGAGCCGTTACAATGAGGTCAGAGACTTATTACCATTAGGTGGTTACCAAGCTGGCCAAGAT
CCTGAAATGGATCTTGCCGTGCGAGTGTATCCGGAGATGGCGCGATTTTTACGCCAGACCACGCATAGTAAAGTCAATCT
GGCTGAGAGCTTAGCGCAATTAGAACAGTTGATGGGAGTGATGGGATATGAGCCAGCGTCCTCTCTCTAA

Protein sequence : 
MRLRLESDVFHDDWPQVPVARVYGRLIRVNGLLLEAVGCQLGMGDRCQIEGRNGRLIEAEVVGFHRDVLCLMPIEPTQGL
MPGARVLPITDEQTIAIGDGLLGRVLDGLGQPLDSLGDLTDISQVPQSHTSYNPLLRQPIRQPLDVGIRAINSLLPIGRG
QRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIEETLGEEGRKRAVIIAAPADTTPLMRLRAMRLSHS
IACAFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVLAEGDDQ
QDPVADAARAILDGHIVLSRKLAEQGHFPAIDINASVSRLAMHIATSSSIEQSQIFRHLLSRYNEVRDLLPLGGYQAGQD
PEMDLAVRVYPEMARFLRQTTHSKVNLAESLAQLEQLMGVMGYEPASSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-70 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 6e-70 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-70 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-70 48
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-79 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-70 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-77 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-66 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-71 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-71 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-75 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-75 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-67 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-67 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-76 45
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-76 45
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 8e-69 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-77 45
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-76 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-77 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-77 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-67 44
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-76 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 3e-70 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-69 43
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-63 43
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-63 43
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 9e-67 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 4e-67 42
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-67 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_3976 YP_001052313.1 FliI/YscN family ATPase VFG1254 Protein 4e-113 60
Sbal_3976 YP_001052313.1 FliI/YscN family ATPase VFG2499 Protein 7e-106 55
Sbal_3976 YP_001052313.1 FliI/YscN family ATPase VFG2331 Protein 2e-102 54
Sbal_3976 YP_001052313.1 FliI/YscN family ATPase VFG0515 Protein 4e-70 48
Sbal_3976 YP_001052313.1 FliI/YscN family ATPase VFG0192 Protein 4e-76 47
Sbal_3976 YP_001052313.1 FliI/YscN family ATPase VFG0390 Protein 2e-75 46
Sbal_3976 YP_001052313.1 FliI/YscN family ATPase VFG2144 Protein 1e-75 45
Sbal_3976 YP_001052313.1 FliI/YscN family ATPase VFG0048 Protein 1e-75 42