Gene Information

Name : Sbal_3776 (Sbal_3776)
Accession : YP_001052118.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 4434079 - 4435242 bp
Length : 1164 bp
Strand : -
Note : KEGG: shn:Shewana3_3614 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes

DNA sequence :
ATGGCAGAGCGTCAATTAGCCACACTGGCAGTGCGTCAGGGTATCGAAAGCGATACTCAATATGGTGCAGTTGTGCCACC
GATTTATTTGTCGACTAATTACGCCTTCGATGGTCATAAAAATCCCCGCGAATTCGATTACAGTCGTTCAGGCAACCCAA
CGCGCTGCATTTTAGGTGAAGCATTAGCCCAATTAGAAAAGGGCGCCACTGGCATAGTGACATGCACTGGCATGGCGGCC
ATCACCCTAGTGACCACATTGCTCGGCCCTGATGACCTGTTGGTGGTGCCCCATGATTGTTACGGCGGTTCTTACCGTTT
ATTTACTAACTTGGCGAAGAAAGGCCAGTTTAAGTTGATTGTGGTCGATCAAACCGACAGCCAAGCGTTAGCCGCCGCTA
TCGGGCAACATCCTAAGATGGTGTGGCTCGAAACCCCATCTAACCCGCTATTGCGTGTGGTGGATATCGAAGCCATTGCT
AAGGCGAGCCATGAGGTCGGCGCGCTGGTGGTGGTCGATAACACTTTTTTATCGCCGATATTGCAACAACCCCTATTGTT
AGGCGCAGATATCGTTATCCACTCCACCACTAAATATATCAATGGTCACAGCGATGTGGTTGGCGGCGCAGTGGTTGCTA
AAGATGCACAAATTGGCGAAAGCTTACATTGGTGGTCGAACACTTTAGGCTTAACGGGATCGGCTTTCGACAGCTACTTA
ACCCTGCGCGGCCTACGTACCTTAGCGGTGCGAATTCGTGAACATCAAACCAATGCCCAGCACATTGTTGAGGTATTGAC
GCAAAGCCCTGTGGTGAGCAAAGTTTATTACCCTGGTCTTGCGGATCACCCAGGTCATGCCATTGCTGCCAAGCAACAAA
AAGGCTTTGGCGCTATGCTGAGTTTTGAACTCAAGGGCGGCGAGGCCGAAGTGGTGGCCTTTTTAGGTGCACTCAGCTTA
TTTAGTGTGGCGGAAAGTTTAGGTGGCGTTGAAAGTTTGGTGGCCGTGCCCGCAACTATGACCCACAGAGCCATGGAGCC
GCAAGCGCGCTTCGAGGCAGGTATTAAGGACACCCTATTGCGTTTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTG
CAGATATTCAAGCAGGATTAGCCGCCGTTGCGGCTTGTCAGTAG

Protein sequence :
MAERQLATLAVRQGIESDTQYGAVVPPIYLSTNYAFDGHKNPREFDYSRSGNPTRCILGEALAQLEKGATGIVTCTGMAA
ITLVTTLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLIVVDQTDSQALAAAIGQHPKMVWLETPSNPLLRVVDIEAIA
KASHEVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDAQIGESLHWWSNTLGLTGSAFDSYL
TLRGLRTLAVRIREHQTNAQHIVEVLTQSPVVSKVYYPGLADHPGHAIAAKQQKGFGAMLSFELKGGEAEVVAFLGALSL
FSVAESLGGVESLVAVPATMTHRAMEPQARFEAGIKDTLLRLSVGIEDAADLVADIQAGLAAVAACQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-59 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-60 41
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_3776 YP_001052118.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 7e-53 41