Gene Information

Name : Sbal_3522 (Sbal_3522)
Accession : YP_001051868.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2602
EC number : 3.5.2.6
Position : 4141455 - 4142342 bp
Length : 888 bp
Strand : -
Note : PFAM: penicillin-binding protein, transpeptidase; KEGG: son:SO0837 beta-lactamase, putative

DNA sequence : 
ATGCGTTCGTTCGCCATATCGACTGTGTTGGTGATGTCCTCACTGTTAGCGTCGTCAATCATAGCTGCCCCGACATTTGC
CTCAACAGCGGCGAAGACGGAGTGGCAAGAAACCCGCAGTTGGGATGCCATTTTTACTCAGCACCAAGTTGAACTGAAAC
AAGCTAAGCAACAACAAGTTAAACCGCAAAAAACTAAGTCCCAGCAAGCCTCGGGCGTGGTGGTGCTGTGGAACGAAAAC
AAGCAACAGGGATATACCAACAGTCTCAAACGTGCCAATCAAGGTTTTTTACCGGCATCGACCTTTAAAATCCCTAATAG
CTTGATTGCGCTCGAGTTGGGTGTGGTGAAGGATGAGCATCAAGTGTTTAAATGGGATGGTAAAAGTCGTGATATCGACA
CTTGGAATCGTGACCACAACTTGATTACCGGGATGAAGTATTCGGTTGTGCCTGTCTATCAAGAGTTTGCCCGCCAAATA
GGTGAGGCGCGGATGTCGAAGATGATCGCCTCCTTCGATTATGGCAATGAGGATATCTCGGGTAACTTAGATAGCTTTTG
GCTCGATGGCGGTATTCGGATTTCGGCCACTGAGCAAATTGATTTCCTGCGCCGGCTTTATCACAACAAGATCCATGCCT
CAGAGCGCAGTCAACGAATCGTTAAGCAGGCCATGCTCACCGAGGCGAATTCTGACTATATTATTCGCGCAAAAACCGGC
TATGCGGTCAGAGCTGAACCAAGTATTGGCTGGTGGGTGGGTTGGGTAGAACTCGATGATAATGTGTGGTTTTTTGCAAT
GAATATGGATATACCCGACGCCGCCGGTTTGCCATTGCGTCAAGCCATCACGAAGGAAGTTTTAAAACTGGAACACGTTA
TTCCTTAG

Protein sequence : 
MRSFAISTVLVMSSLLASSIIAAPTFASTAAKTEWQETRSWDAIFTQHQVELKQAKQQQVKPQKTKSQQASGVVVLWNEN
KQQGYTNSLKRANQGFLPASTFKIPNSLIALELGVVKDEHQVFKWDGKSRDIDTWNRDHNLITGMKYSVVPVYQEFARQI
GEARMSKMIASFDYGNEDISGNLDSFWLDGGIRISATEQIDFLRRLYHNKIHASERSQRIVKQAMLTEANSDYIIRAKTG
YAVRAEPSIGWWVGWVELDDNVWFFAMNMDIPDAAGLPLRQAITKEVLKLEHVIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bla OXA-10 CAJ77047.1 Oxacillinase Not tested AbaR1 Protein 1e-57 50
bla OXA-129 AFG30109.1 OXA-129 beta-lactamase Not tested PAGI-2 Protein 4e-53 48
blaOXA-129 AET25386.1 OXA-129 beta-lactamase Not tested PAGI-2(C) Protein 4e-53 48
ACICU_00226 YP_001844885.1 Beta-lactamase class D Not tested AbaR20 Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_3522 YP_001051868.1 beta-lactamase HM015773.1.gene6.p01 Protein 2e-96 76
Sbal_3522 YP_001051868.1 beta-lactamase HQ700343.1.gene1.p01 Protein 3e-93 75
Sbal_3522 YP_001051868.1 beta-lactamase JN205800.1.gene6.p01 Protein 4e-96 75
Sbal_3522 YP_001051868.1 beta-lactamase AY500137.1.gene1.p01 Protein 1e-96 71
Sbal_3522 YP_001051868.1 beta-lactamase AY343493.1.gene1.p01 Protein 4e-70 54
Sbal_3522 YP_001051868.1 beta-lactamase NC_010410.6002874.p0 Protein 7e-58 50
Sbal_3522 YP_001051868.1 beta-lactamase U37105.2.gene2.p01 Protein 7e-58 50
Sbal_3522 YP_001051868.1 beta-lactamase X75562.1.gene1.p01 Protein 3e-55 49
Sbal_3522 YP_001051868.1 beta-lactamase AM412777.1.gene1.p01 Protein 4e-57 49
Sbal_3522 YP_001051868.1 beta-lactamase AJ854182.1.gene1.p01 Protein 2e-57 49
Sbal_3522 YP_001051868.1 beta-lactamase AF231133.1.gene3.p01 Protein 8e-56 49
Sbal_3522 YP_001051868.1 beta-lactamase U59183.1.gene3.p01 Protein 4e-57 49
Sbal_3522 YP_001051868.1 beta-lactamase Z22590.1.gene1.p01 Protein 3e-57 49
Sbal_3522 YP_001051868.1 beta-lactamase AY445080.1.gene1.p01 Protein 4e-57 49
Sbal_3522 YP_001051868.1 beta-lactamase X58272.1.gene1.p01 Protein 2e-53 48
Sbal_3522 YP_001051868.1 beta-lactamase AM932669.1.gene2.p01 Protein 3e-53 48
Sbal_3522 YP_001051868.1 beta-lactamase AF024602.1.gene3.p01 Protein 5e-37 42
Sbal_3522 YP_001051868.1 beta-lactamase AY619003.1.gene1.p01 Protein 1e-30 41
Sbal_3522 YP_001051868.1 beta-lactamase EU086834.1.gene1.p01 Protein 2e-32 41
Sbal_3522 YP_001051868.1 beta-lactamase EU086830.1.gene1.p01 Protein 2e-32 41
Sbal_3522 YP_001051868.1 beta-lactamase AY423074.1.gene1.p01 Protein 2e-34 41