Gene Information

Name : Sbal_3160 (Sbal_3160)
Accession : YP_001051510.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 3698746 - 3699900 bp
Length : 1155 bp
Strand : -
Note : KEGG: son:SO3469 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGAGCTTGAACATAAGTTGGTCCGTACTCGATACCCAAATGATGAGCCGCGCGATTCAATTGGCGCGCAAAGGTTTTTA
TACCACCAGACCCAATCCCAGTGTGGGCTGCGTTATTGTTAAAGATAATCAGATCGTCGGCGAAGGTTATCATCAAAAAG
CGGGTGAGCCCCACGCCGAAGTGCATGCGCTACGCATGGCTGGCGAACACGCCCGTGGCGCAACGGCCTATGTCACCTTA
GAGCCATGCAGCCATTATGGCCGCACGCCGCCCTGCGCCTTGGCGCTGATCAATATTGGCGTTAAACGTGTGGTGGTAGC
GGTTGAAGATCCTAATCCGCAAGTGGCTGGTCGCGGTATTCAAATGCTGCGCGACGCCGGTATTGAAGTGGATGTGGGGT
TACACCGCGATGAAGCTTATGCCTTGAATTTAGGCTTTATGAAGCGGATGGAATCAGGTTTACCCAGAGTTACAGTCAAA
TTAGCTGCGAGTCTCGATGGTAAAACCGCGCTGTCTAACGGTGTGTCTAAATGGATTACTGGGCCTGAATCTCGCCGCGA
CGTGCAGCGCTTACGCTTACGTTCCTGCGCGTTGGTGACAGGGATTGAAACCATACTGGTGGACGATCCCTCGCTCAATG
TGCGATATCAAGAACTTGGCGGCATAAAAGACAGCGTAACCGAAGCGCAATTACTGCAGCCATTAAGAGTCATACTCGAC
AGTCGCGCCCGTTTGCCGTTATCGGCTGCCTGTTTGGCTGTCGTATCGCCGATACTCTTGGTCTCGACCGTGGCTTATCC
CGCAAAGTTTCAAGCACAATTGCCCTCCCATGTGAGTTGCCTCGTGTTACCTGCGATTGCAGGTCGCGTATCCTTACCTG
AACTATTAAGCTATTTAGGCCAAAGCTGTAATCACGTGCTAGTGGAAGCGGGTGCAACCTTAGCGGGCGCTTTTTTAGCG
CAGGGGCTGGCCGATGAATTAGTGCTGTACCAAGCGATGAAAATCCTCGGTGGGCAAGGGCGTAATCTATTGCAGCTACC
CGATTATCAAACCATGGCGCAAATTCCTGCATTAATGTTGGTCGATGAGCGCAAATTAGGGCCAGATACCCGTTTAATCT
TGAGCGTTATGCTTGATACTTCTTTAATTAATTAA

Protein sequence :
MSLNISWSVLDTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEHARGATAYVTL
EPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEVDVGLHRDEAYALNLGFMKRMESGLPRVTVK
LAASLDGKTALSNGVSKWITGPESRRDVQRLRLRSCALVTGIETILVDDPSLNVRYQELGGIKDSVTEAQLLQPLRVILD
SRARLPLSAACLAVVSPILLVSTVAYPAKFQAQLPSHVSCLVLPAIAGRVSLPELLSYLGQSCNHVLVEAGATLAGAFLA
QGLADELVLYQAMKILGGQGRNLLQLPDYQTMAQIPALMLVDERKLGPDTRLILSVMLDTSLIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-70 50
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-70 50