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Name : Sbal_2876 (Sbal_2876) Accession : YP_001051228.1 Strain : Shewanella baltica OS155 Genome accession: NC_009052 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3387765 - 3389705 bp Length : 1941 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sdn:Sden DNA sequence : ATGGAATTTTTGCAGTGTTTATTTTCTTTAAAGCGGGCACAGAAGCGTCTAGTGAGTGTCGCGATTGATTCGGTATTTCT CTTAGTCGCATTTTGGGCTGCTTTGTTGGTACGTTTGGATGCCGTAAGCGTATTTACTAATAGCGTATACTGGTTGCTCA TTGTTTTGGTTGTGCCTGTGAGTATCATGGTGTTTGCTAAGCTGGGATTGTATCGTGCTGTGCTTAGATATATGGGATTG CAGGCGCTAACTGCGATTATTGTTGGGGTTCTTGCATCAACAGTGTCGTTAGTGTTAATTGCGTATTACAGTGAGGCGAA TTTACCCCGTACGGTACCAATTATTTACGCAGCTTTTGCCTTGGTATTTGTCGGTGGAACTCGCGCTATGGTGCGCTCGT TAGTAGGGTCTGGTCTAAAGCGGGTTGGCGAACCTGTGATTATTTATGGGGCAGGGGTCAGCGGACGGCAGTTAGTGACC TCATTGGTCCAGAGTCATGAATATTATCCTTTTGCATTTGTTGATGATGATGTGACTTTACATGGCACTGTCATCCAAGG AGTGCATGTTCATTCGCCTTCTATTATTAAAAAACTCATCACACAAAAAGCAGCTACTAAAGTGTTGCTGGCTATGCCAA GTGCTTCTCGCTCTCGTCGCCAAGAGATTTTAGTTAAGCTCGAACCTTTGGCTGTACAAGTTTTAACCTTACCTGCAATG GCTGATCTGGTAAGTGGTAATAAGCTTTATAGCGATATTAAAGAAGTCGAAATCGATGATTTGTTAGGACGTGATGCAGT TACTCCCCGTTGCGACTTAATGGTCGCCAATATCCGCAACAAAGTAGTGATGGTCACGGGAGCTGGCGGCTCGATTGGTT CTGAGTTATGTCGACAGATATTAAAACAATCACCTAAAAAATTAGTGTTATTTGAATTATCTGAGTTTGCCTTGTATACG ATTGATCGTGAACTTTCTGCGACAGCTTTTGAGTTAGGGCTTGATGTTAAGATTTTACCAATTATGGGTTCGGTACAACG GGAAAATCGTGTTCAAGCAGTAATGCAATCTTTTAGAGTGCAAACTGTGTATCACGCTGCAGCTTATAAGCATGTGCCAT TGGTGGAGCACAATGTCGTTGAAGGTGTGCGTAATAATATATTTGGTACTTTATATACTGCACGCGCAGCTATTGCAGCT AAGGTTGAAACTTTTGTATTGATTTCGACGGATAAAGCTGTACGACCTACTAATATCATGGGCACTACTAAGCGTATGGC CGAGTTGGCACTTCAAGCGTTATCTAAAGAAACACATCAAACCCGTTTTAGCATGGTTCGCTTTGGTAATGTTTTGGGCT CTTCAGGTTCTGTAGTGCCATTATTCCGAAAGCAAATTGCTAATGGCGGCCCTGTTACTGTTACGCATCGTGACATAACT CGTTTCTTTATGACCATTCCTGAGGCTTCACAGTTGGTTATCCAAGCGGGGGCAATGGGCAAAGGTGGCGATGTGTTCGT GCTTGACATGGGTAAAGCAGTTAAAATTGTTGATTTAGCTGCAAAAATGATTCGCCTTAGCGGTTTTGAAGTAAAGGATG AACTCAATCCCGATGGTGATATTGCCATCGAGTTTAGTGGCTTACGTCCTGGTGAAAAATTATACGAAGAATTACTGATT GGTGATGATGTTACTGGCACCGAACATGAGCGTATTATGACAGCCAACGAAATTTTTCTTTCTTGGAAAGAGTTAGAATG TATTCTTAATCGCTTAGATAAAGCTTGTCATGAGTTTAATCATGAAGCTATACGAGAAATCTTACTGTCTGCACCAACAG GTTTTAATCCAACAGACGGGATATGCGATTTAGTGTGGCAACAAAAGAAAAAATTAAGCGCTGTTGATGGCCAAAATAAA GTTGTTCCATTAGTTTCTTAG Protein sequence : MEFLQCLFSLKRAQKRLVSVAIDSVFLLVAFWAALLVRLDAVSVFTNSVYWLLIVLVVPVSIMVFAKLGLYRAVLRYMGL QALTAIIVGVLASTVSLVLIAYYSEANLPRTVPIIYAAFALVFVGGTRAMVRSLVGSGLKRVGEPVIIYGAGVSGRQLVT SLVQSHEYYPFAFVDDDVTLHGTVIQGVHVHSPSIIKKLITQKAATKVLLAMPSASRSRRQEILVKLEPLAVQVLTLPAM ADLVSGNKLYSDIKEVEIDDLLGRDAVTPRCDLMVANIRNKVVMVTGAGGSIGSELCRQILKQSPKKLVLFELSEFALYT IDRELSATAFELGLDVKILPIMGSVQRENRVQAVMQSFRVQTVYHAAAYKHVPLVEHNVVEGVRNNIFGTLYTARAAIAA KVETFVLISTDKAVRPTNIMGTTKRMAELALQALSKETHQTRFSMVRFGNVLGSSGSVVPLFRKQIANGGPVTVTHRDIT RFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKAVKIVDLAAKMIRLSGFEVKDELNPDGDIAIEFSGLRPGEKLYEELLI GDDVTGTEHERIMTANEIFLSWKELECILNRLDKACHEFNHEAIREILLSAPTGFNPTDGICDLVWQQKKKLSAVDGQNK VVPLVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-81 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal_2876 | YP_001051228.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 3e-118 | 50 |
| Sbal_2876 | YP_001051228.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-81 | 45 |
