|
Name : Sbal_1959 (Sbal_1959) Accession : YP_001050332.1 Strain : Shewanella baltica OS155 Genome accession: NC_009052 Putative virulence/resistance : Virulence Product : type III secretion system needle protein Function : - COG functional category : - COG ID : - EC number : - Position : 2274094 - 2274309 bp Length : 216 bp Strand : + Note : TIGRFAM: type III secretion system needle protein; KEGG: cvi:CV2585 secretion system apparatus DNA sequence : ATGGACTTAAGTGCCATAGTCAATCAATTGTCTCAGCTATCGACGCGCTCGGCTCAAGAGGTACAGGCCAAGATGTCTGC AGGTGATTTGAACGATCCCGACAAGATGATCAAAGCCCAATTTGCCATGCAGCAATACTCTAATTTTGTCGGCTATGAGA GCGCCATGATAAAGGCGATTAAAGACATGATCCAGGGGATCATTTCCAAGATTTAA Protein sequence : MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLNDPDKMIKAQFAMQQYSNFVGYESAMIKAIKDMIQGIISKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaG | NP_456122.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 5e-17 | 53 |
| ssaG | NP_805077.1 | pathogenicity island protein | Virulence | SPI-2 | Protein | 5e-17 | 53 |
| ssaG | NP_460371.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 5e-17 | 53 |
| ssaH | AAC28874.1 | SsaH | Virulence | SPI-2 | Protein | 4e-17 | 53 |
| ssaG | CAA12193.1 | SsaG | Virulence | SPI-2 | Protein | 4e-17 | 53 |
| ssaG | YP_216414.1 | secretion system apparatus protein SsaG | Virulence | SPI-2 | Protein | 9e-17 | 53 |
| escF | AFO66347.1 | putative LEE-encoded type III secretion system structural component | Not tested | SESS LEE | Protein | 2e-10 | 43 |
| escF | AFO66385.1 | putative LEE-encoded type III secretion system structural component | Virulence | SESS LEE | Protein | 2e-10 | 43 |
| escF | AAL60254.1 | EscF | Virulence | LEE | Protein | 3e-10 | 41 |
| escF | CAC81878.1 | EscF protein | Virulence | LEE II | Protein | 3e-10 | 41 |
| escF | CAI43858.1 | EscF protein | Virulence | LEE | Protein | 3e-10 | 41 |
| eprI | ACU09442.1 | type III secretion apparatus needle protein EprI | Virulence | LEE | Protein | 3e-10 | 41 |
| escF | YP_003223459.1 | T3SS structure protein EscF | Virulence | LEE | Protein | 5e-10 | 41 |
| escF | AAC38398.1 | EscF | Virulence | LEE | Protein | 3e-10 | 41 |
| escF | YP_003236072.1 | T3SS structure protein EscF | Virulence | LEE | Protein | 5e-10 | 41 |
| escF | AAC31497.1 | L0018 | Virulence | LEE | Protein | 3e-10 | 41 |
| escF | NP_290252.1 | hypothetical protein | Virulence | LEE | Protein | 5e-10 | 41 |
| escF | AAK26731.1 | EscF | Virulence | LEE | Protein | 3e-10 | 41 |
| ECs4552 | NP_312579.1 | protein EscF | Virulence | LEE | Protein | 5e-10 | 41 |
| escF | AAL57558.1 | EscF | Virulence | LEE | Protein | 3e-10 | 41 |
| escF | YP_003232169.1 | T3SS structure protein EscF | Virulence | LEE | Protein | 5e-10 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal_1959 | YP_001050332.1 | type III secretion system needle protein | VFG0507 | Protein | 2e-17 | 53 |
| Sbal_1959 | YP_001050332.1 | type III secretion system needle protein | VFG0746 | Protein | 1e-10 | 41 |
| Sbal_1959 | YP_001050332.1 | type III secretion system needle protein | VFG0796 | Protein | 1e-10 | 41 |
