Gene Information

Name : Sbal_1951 (Sbal_1951)
Accession : YP_001050324.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Virulence
Product : type III secretion low calcium response chaperone LcrH/SycD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2266609 - 2267100 bp
Length : 492 bp
Strand : +
Note : TIGRFAM: type III secretion low calcium response chaperone LcrH/SycD; KEGG: cvi:CV2578 type III secretion system CesD protein

DNA sequence : 
ATGTCCGCTAAGGAGTCAGTAATGAAACAGCAAGAATTTGAAGTCCTTGAACATTTTCTGCAACGGGGCGGCTCACTGCG
TATGTTGGCTGATGTCGAGCAAAGTGACTTGAATGTGCTGTACCAATACGCGTTGCAGTTAATGGCCTGCCGAGACCAAC
AGGGGGCGAAGCGGATCTTTTACCTCTTGATGCGCATAGATCAATGGAATTACGACTACTGCTTTTCTCTAGGGATATGC
TGCCAGCAGTTACACGAACATGAAGAGGCCATTTTCTGTTTGGGCCGGGCAGGGATGATCAAAGTCGATAATCCTTTACC
CGCTTACCATGCTGGTTTGAGCTACTTGGCTTTGGGCAACCACGACTATGCCAAGAGAAGCTTTAACGCCAGTCTACGTT
GGTGTGAAGGCCACCCAGAGAGCACTGGGATCGCCGCCAGAGCACAGCGCGGACTGGCCACACTCGCGAAGGAGAATTCC
CATGTCAATTAA

Protein sequence : 
MSAKESVMKQQEFEVLEHFLQRGGSLRMLADVEQSDLNVLYQYALQLMACRDQQGAKRIFYLLMRIDQWNYDYCFSLGIC
CQQLHEHEEAIFCLGRAGMIKVDNPLPAYHAGLSYLALGNHDYAKRSFNASLRWCEGHPESTGIAARAQRGLATLAKENS
HVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 7e-20 43
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 5e-20 43
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 5e-20 43
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 5e-20 43
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 3e-20 43
sscA CAA12186.1 SscA Virulence SPI-2 Protein 3e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_1951 YP_001050324.1 type III secretion low calcium response chaperone LcrH/SycD VFG0500 Protein 1e-20 43