Gene Information

Name : Sbal_1949 (Sbal_1949)
Accession : YP_001050322.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Virulence
Product : EspA family secreted protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2265206 - 2265781 bp
Length : 576 bp
Strand : +
Note : PFAM: EspA family secreted protein; KEGG: sec:SC1419 secretion system effector SseB

DNA sequence : 
ATGGATATTTCAAATGTAGGCAATCAAGGCACTAGCATTATTAACTCTCAACAACCTGAAAGCGTTAAAAATCAAATCGC
TTCACGCGGTGATTCTGTGCTCTCAGGGGGAATTGCAGTTTTATATATGTTTATGAATTTGCTCTCTGAATTAGCCGATG
CAAAATACAGTCAAATGCAGCAAAAAGCCGATGTTTCTCGTCAAGCGCAGGATATGGCAAACCAGGTGGATGAGGTCATT
GCAAACGTCTCTAAAGATGGTGATAAAGCCGTAGGTAAACTTCCAGATGATGTCGTGAAATACATGCACGACAATGGTTT
CACTATAGATGGTATGACCATTGATAAGTACCTTGCCAAGAATGACCCTGACGGCAAAGGGCTAGATAAAGGTAAGTTAC
AAGCGGTGAAAGCAGCGTTGGAATCCGTATCGAACCGTGCCTCTGACTTTGTTTCACAATCCCAGCTACAGCTGCAAAAA
ATTATGCAGACTTACAACGTTACCGTCAGCTTGTTAAACAGTATGCAAACCATGCTGGCGGAAATGAACAAGTCGATTGC
GCAAAACATTCGTTAA

Protein sequence : 
MDISNVGNQGTSIINSQQPESVKNQIASRGDSVLSGGIAVLYMFMNLLSELADAKYSQMQQKADVSRQAQDMANQVDEVI
ANVSKDGDKAVGKLPDDVVKYMHDNGFTIDGMTIDKYLAKNDPDGKGLDKGKLQAVKAALESVSNRASDFVSQSQLQLQK
IMQTYNVTVSLLNSMQTMLAEMNKSIAQNIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 1e-26 42
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 1e-26 41
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-26 41
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 1e-26 41
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 9e-27 41
sseB CAA12185.1 SseB Virulence SPI-2 Protein 9e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_1949 YP_001050322.1 EspA family secreted protein VFG0499 Protein 4e-27 41