Gene Information

Name : Sbal_1943 (Sbal_1943)
Accession : YP_001050316.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2257681 - 2258325 bp
Length : 645 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: cvi:CV2599 probable two-component response regulator, LuxR family

DNA sequence : 
ATGGAATTTAGTCATGGTAAAGTGATCAATATTTTAGTGGTCGATGATCATTCGTTGATTTTCGACGGATTACTGGGTTG
TTTAGCGCCTTATCCAGAGCTTAATCTAATTGGATCGGTTGAAGATGGGCTCGCGGTATACGAGAAATGCCTCAAACTCA
GACCAGATCTGGTTTTTATGGATCTGAAATTACCGGGAATGGGTGGATTTGACGTGATTCGTCAGCTCAGACAACGTTGG
CCAGAGATGATGATTATCATGTTAACGGCGACGGTTGAGGAAAAAAGTGCGCGGGAAGCGCTCGATGTCGGCGCCAATGG
TTATGTGTTAAAATATAGCCCTAAGAGCACGCTGTTAGCGGCAATCAAATGTGTATGTAAGGGTAAAAACTTTATCGATC
CTAGCTTAGATGAGAGACAAATTGCTGCTTTGAGTGGGGTAGTCGATGGGGATATGCCTTTGCTGACCCCCCGCGAGCAA
CAAGTGCTAAAACTCATCTGTGAGGGGCGCCGCAACCGTGATATTGCCGAAGATTTAGTGATTGGTTTAAAAACGGTAGA
GACTCACAGGATGAATTTAATGCGCAAACTTAATGCGCATAACGTCGCCGAGTTAATGCATTGGGTACAAAGGCTTGGAT
TATGA

Protein sequence : 
MEFSHGKVINILVVDDHSLIFDGLLGCLAPYPELNLIGSVEDGLAVYEKCLKLRPDLVFMDLKLPGMGGFDVIRQLRQRW
PEMMIIMLTATVEEKSAREALDVGANGYVLKYSPKSTLLAAIKCVCKGKNFIDPSLDERQIAALSGVVDGDMPLLTPREQ
QVLKLICEGRRNRDIAEDLVIGLKTVETHRMNLMRKLNAHNVAELMHWVQRLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 2e-46 53
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 4e-35 48
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 3e-39 48
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 2e-39 48
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 2e-39 48
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 2e-39 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal_1943 YP_001050316.1 two component LuxR family transcriptional regulator VFG0492 Protein 6e-40 48