|
Name : Sbal_1928 (Sbal_1928) Accession : YP_001050303.1 Strain : Shewanella baltica OS155 Genome accession: NC_009052 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2244755 - 2245564 bp Length : 810 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: sdn:Sden_3021 integrase, catalytic region DNA sequence : ATGAGTGTCAGTAAGTCAGGCTATTACGATTGGCATAAACGCCCTGCAAACGTGATAAGCCTTGAAACACTGAAGCTTTA TCGCCTTGTTAGACAGCTATTTAAGCAAAGTCGAGGCAGCTTAGGAAATCGTGAAATGGTGAAGAAATTGCGCAAGGAAG GCTACCAGGTTGGTCGCTATCTCGTTCGTAAAATTATGCACCGCCTTCGACTCAAAGCAACCCAGCGACGCGCTTACAAG GTGACGACACAGCGAAAACACTCAGATGCAGTGGCAGATAACCTGCTAAACATGAACTTTAACCCCGTATCGGCTAATGA GGTTTGGGCGGGTGACGTGACCTATTTAAAGACGGGTGAGGGCTGGATGTATTTAGCTGTGGTGATGGATTTATATTCAC GCCGGATTGTGGGATGGCACATAGACAAACGCATGACCACGGATTTGATATCTAAGGCATTAATAAAAGCCTACAACCTG CGCCAACCGGCCAGAGGGCTGGTATTTCACAGTGATCGAGGCTCGCAATATACCAGTAAGCAATTCGGTAGGCTGCTATT GAGCTATGGTATCCGAGCCAGCATGGGTGATGTGGGAGCGTGTTGGGATAATGCCGTTGTTGAGCGATTCTTTGGCAGCT TAAAACACGATTGGATTTTTAAAGTTAATCAACCAACAAGGGAGTTTATGAAGCAAGATGTGACTGCTTACATGAAATAT TACAACTTGGAGCGACTTCATTCTGCTAATGGTGATCTGTCACCTGTAGAGTTTGAAAATTCTCAACTAAAAGTGTCCAG TTTGGGTTGA Protein sequence : MSVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKATQRRAYK VTTQRKHSDAVADNLLNMNFNPVSANEVWAGDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNL RQPARGLVFHSDRGSQYTSKQFGRLLLSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY YNLERLHSANGDLSPVEFENSQLKVSSLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-38 | 42 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 2e-38 | 42 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-37 | 41 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 1e-37 | 41 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 3e-37 | 41 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 3e-37 | 41 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 2e-35 | 41 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 2e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal_1928 | YP_001050303.1 | integrase catalytic subunit | VFG1484 | Protein | 1e-35 | 41 |
