Gene Information

Name : rdgC (Sbal_1376)
Accession : YP_001049763.1
Strain : Shewanella baltica OS155
Genome accession: NC_009052
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 1580736 - 1581650 bp
Length : 915 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAATCTTACTCTTTATCGTTTCAATAAACCTTTTGCCGTCGAAACCGAAGCGCTAGAAACTGCGTTGGC
CGATTTCACTTTCTCTCCGTGCTCAAGCCAAGATGTCAGTAAATTTGGTTTCTCTAATGCTTTAGGCAAGAAAGGCAGCT
CCTTGGTACACAGTGCCGACAATCGCCATCTGATCTGTGTAACTAAAGAAGAGAAAATCCTCCCAGGCCAAGTCATCAAA
GAAGCCTTAGAAGAAAAAGTCGCCCTCATTGAAGATGAAGAAAATCGTAAGATGGCGAAAAAAGAAAAAGATGCGCTAAA
AGATGAAATCATTACTAGCCTACTGCCACGCGCTTTTTCACGCCGCAGCCAAACCCATGCCTTGATTTTGCCAGAGCTGG
AAATGATCCTTGTCGACAGTTCAAGTGCCACTAAAGCCGAAGAGCTGTTAGCGTTATTACGTAAAGCGCTCGGTAGTTTG
CCGGTGATCCCATTGAGCTTTAAAGCGCCAGTCGAATCCAATTTAACCGAATGGTTAAAACTTGGCAGCGCGCCATTACC
TTTTGAAATGCAAGATGAAGCTGAACTTAAATCCGAAGCGGATGAAGGCGGCATTGTACGTTTCAAGCAACAGGATTTAA
AAGAAGACGAAGTATTAGCTCACCTCGCAACAGGCAAGCAAGTCCACAAGTTAGCACTGCATTTCGGCCAATCGATTGCA
CTATTATTGCAATCGGATGCCAGCGTTAAACGCCTTAAATTCTCTGAAGAATTTAGAGCGGGTAACGATGAAGTGGGCAC
AGACGACCCTATGGCACGTTTAGATGCAGACTTTGCCTTAATGGGCAGCGAGTTAGTCGCCTTGATGCATGCGCTCGTGG
CAGCACTAGGTGGACTCGAAGAAGCACAAGTTTAA

Protein sequence :
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSADNRHLICVTKEEKILPGQVIK
EALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKAEELLALLRKALGSL
PVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEEAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 2e-48 44