|
Name : Memar_0811 (Memar_0811) Accession : YP_001046726.1 Strain : Methanoculleus marisnigri JR1 Genome accession: NC_009051 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 794833 - 796110 bp Length : 1278 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGAGTTGAAGTTCGTTCGTGCACACCCCGAGATCGTCCGGGCAGACCTCACGAAGAGAGGAGACACCGAGAAACT GGCCTGGGTCGACGAGGTGCTGGAGATGGACAGGAGGGCACGGGAACTCACCGTTGCGATCGGGGATCTCCGCAACCGGA GAAACGTCATTTCCCGCGAGATCAGCCAGGCGAGGAAGGCGGGGAACGATATCACCGAACTCCTCGCCGAAGCCGCAGGC CTCCCGGAACGGATCAAGGAGGTGGAGACGGAACGCGAGACGCTCACCGAAGCGGTACGCTACCGCCTGATGCGGCTCCC GAACATCCTCCACGAGAGCGTGCCCGTCGGCAAGGACGACTCCGAGAACGTCGAGATCCGGCGATGGGGCGAACCGGAGA TCCCTGCGTTCGACCTGGAGAACCACGGCGCGCTCGCCGTCGAGCACGGTTGGGCGGACTTCGAACGCGCGGCGAAGATT GCCGGATCCGGGTTCTACTTCCTGAAGGGCAGGCTCGCCCTGCTCGATATGGCGCTCCAGCGGTTCGCGATGGATATCCT CGTCGAACACGGGTATACCCCGATCATTCCGCCCTACATGATGAACCGGGCCGCATACGAGGGCGTGACCGACCTCGCCG ACTTCGAGAACGTCATGTACAGGATCGACGGTGAGGACGAGTACCTCATCGCGACGAGCGAGCACCCGATGGCCGCGATG TACTGCGACGAGATCTTCGAGGAGAAGGATCTGCCGCTCCGGCTTGCGGGGCTGAGCCCGTGTTTCCGCCGCGAGATCGG GGCGCACGGGCTCGATACGAAAGGGCTCTTCCGGGTCCACCAGTTCCACAAGGTGGAGCAGTTCATCTACGCGACGCCGG AGCAGTCCTGGGACCTTCACGAGGAACTGATGGCGAACGCCGAGGAGGTCTTCCAGCGGCTCGGCCTTCCCTACCGGATT GTCTCGATCTGCACGGGAGATATCGGGACGGTCGCCGCGAAGAAGTACGACCTCGAGGTCTGGATGCCGCGCGAGGAGCG CTACCGCGAAGCGGTCTCCTGCTCGAACTGCACGGCCTACCAGGCGGTTCGGCTGAACATCAAGGTGCGCAACCCGACCG AGTTCACCGAGAAGCGCTACGTGCATACCCTGAACAGCACCGCGATCGCGACCTCCCGCGCGATCCGGGCGATCCTCGAG AACAACCAGAACGAGGACGGCTCGGTCACGATCCCGAAGGCCCTCAGGCCCTACCTCTACGGCAGCGAGACGCTGTAA Protein sequence : MLELKFVRAHPEIVRADLTKRGDTEKLAWVDEVLEMDRRARELTVAIGDLRNRRNVISREISQARKAGNDITELLAEAAG LPERIKEVETERETLTEAVRYRLMRLPNILHESVPVGKDDSENVEIRRWGEPEIPAFDLENHGALAVEHGWADFERAAKI AGSGFYFLKGRLALLDMALQRFAMDILVEHGYTPIIPPYMMNRAAYEGVTDLADFENVMYRIDGEDEYLIATSEHPMAAM YCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHKVEQFIYATPEQSWDLHEELMANAEEVFQRLGLPYRI VSICTGDIGTVAAKKYDLEVWMPREERYREAVSCSNCTAYQAVRLNIKVRNPTEFTEKRYVHTLNSTAIATSRAIRAILE NNQNEDGSVTIPKALRPYLYGSETL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-70 | 41 |
